RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TMCO6Q96DC7 493 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 CHMP6Q96FZ7 201 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 OR7D2Q96RA2 312 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 OR52E6Q96RD3 313 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 CCDC28BQ9BUN5 200 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 ACTRT3Q9BYD9 372 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 PIGUQ9H490 435 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 FGFR1OP2Q9NVK5 253 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 FAM120CQ9NX05 1096 aaKnown RBP11.27□□□□□ -0.61
SYNE2-214ENST00000554928 GIN1Q9NXP7 522 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 ZIM2Q9NZV7 527 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 BTNL2Q9UIR0 455 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 WIF1Q9Y5W5 379 aa11.27□□□□□ -0.61
SYNE2-214ENST00000554928 NUP214P35658 2090 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 A0A1B0GVC2 190 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 NPIPA2E9PIF3 369 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 NPIPA3F8WFD2 350 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 LDLRP01130 860 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 ABOP16442 354 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 TCEA1P23193 301 aaKnown RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 RPP38P78345 283 aaKnown RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 FUT5Q11128 374 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 SLC10A1Q14973 349 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 GSTA3Q16772 222 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 DPY19L1Q2PZI1 675 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 C4orf17Q53FE4 359 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 HSP90B2PQ58FF3 399 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 WIPI1Q5MNZ9 446 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 DCST1Q5T197 706 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 SAXO2Q658L1 398 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 BNC2Q6ZN30 1099 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 YRDCQ86U90 279 aaKnown RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 CD163Q86VB7 1156 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 PACS2Q86VP3 889 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 LSRQ86X29 649 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 MIER2Q8N344 545 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 GATSQ8NAP1 163 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 OR5M9Q8NGP3 310 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 GOT1L1Q8NHS2 421 aaPredicted RBP11.26□□□□□ -0.61
SYNE2-214ENST00000554928 RAB8BQ92930 207 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 RELTQ969Z4 430 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 SLC35G5Q96KT7 338 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 ZBTB18Q99592 522 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 BTBD2Q9BX70 525 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 OR51I1Q9H343 314 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF385DQ9H6B1 395 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 MED4Q9NPJ6 270 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 SLC52A3Q9NQ40 469 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 PNPLA3Q9NST1 481 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 SLC5A6Q9Y289 635 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 SLC6A5Q9Y345 797 aa11.26□□□□□ -0.61
SYNE2-214ENST00000554928 TRGV5A0A0B4J1U4 118 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 A0A0G2JND7 137 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 CENPVL1A0A0U1RR11 272 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 CCDC154A6NI56 674 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 KDM4EB2RXH2 506 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 OIP5O43482 229 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 ATP8B1O43520 1251 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 GMFGO60234 142 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 ZG16O60844 167 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 TRAPPC6AO75865 159 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 KCNH1O95259 989 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 OXSR1O95747 527 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 HPNP05981 417 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 TPOP07202 933 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 MATN1P21941 496 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 UQCRC2P22695 453 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 PTGS2P35354 604 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 MRPL19P49406 292 aaKnown RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 POLR2JP52435 117 aaKnown RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 POU6F2P78424 691 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 ADORA2A-AS1P86434 159 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 SNTA1Q13424 505 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 VPS26BQ4G0F5 336 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 COX20Q5RI15 118 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 DCST2Q5T1A1 773 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 TNFAIP8L2Q6P589 184 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 ZCCHC12Q6PEW1 402 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 SLC2A7Q6PXP3 512 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 PLCZ1Q86YW0 608 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 MARVELD2Q8N4S9 558 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 FAM83FQ8NEG4 500 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 OR1J4Q8NGS1 313 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 FAM57AQ8TBR7 257 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 PNPT1Q8TCS8 783 aaKnown RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 ADAMTS15Q8TE58 950 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 MOAP1Q96BY2 351 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 AURKBQ96GD4 344 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 PANX1Q96RD7 426 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 STACQ99469 402 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 SLC35A5Q9BS91 424 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 DSN1Q9H410 356 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 DUSP22Q9NRW4 184 aa11.25□□□□□ -0.61
SYNE2-214ENST00000554928 MED11Q9P086 117 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms