RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SELENONQ9NZV5 590 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PIPOXQ9P0Z9 390 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SLC23A2Q9UGH3 650 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 APOBEC3BQ9UH17 382 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF443Q9Y2A4 671 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 IGKV1D-42A0A075B6H8 117 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 IGLV3-12A0A075B6K2 115 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 A0A1W2PR48 441 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PRRT4C9JH25 899 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TRIM77I1YAP6 450 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ERVH48-1M5A8F1 160 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TPST1O60507 370 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF780AO75290 641 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CA11O75493 328 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 IL2RAP01589 272 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 IL3P08700 152 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CLTBP09497 229 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ANXA4P09525 319 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ASAH2BP0C7U1 165 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CALCBP10092 127 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 C6P13671 934 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CSF2RAP15509 400 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 C5AR1P21730 350 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PRKACGP22612 351 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CTSSP25774 331 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 GSK3AP49840 483 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZP1P60852 638 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CTAG1AP78358 180 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 IL15RAQ13261 267 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SPHARQ15513 63 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ALG11Q2TAA5 492 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM236Q5W0B7 351 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SPESP1Q6UW49 350 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF836Q6ZNA1 936 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 NUDT13Q86X67 352 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CDC20BQ86Y33 519 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SAMD14Q8IZD0 417 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ARL14EPQ8N8R7 260 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 KDF1Q8NAX2 398 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CLHC1Q8NHS4 586 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF519Q8TB69 540 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 POF1BQ8WVV4 589 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 FIG4Q92562 907 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CNOT9Q92600 299 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 B3GALT6Q96L58 329 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 MS4A4EQ96PG1 132 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 RIOK2Q9BVS4 552 aaKnown RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ACTRT3Q9BYD9 372 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 GPR63Q9BZJ6 419 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SEMA4CQ9C0C4 833 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 MCCC2Q9HCC0 563 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SH2D2AQ9NP31 389 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 SEMA4GQ9NTN9 838 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 WDR70Q9NW82 654 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 IRAK4Q9NWZ3 460 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 OR6C2Q9NZP2 312 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ABRACLQ9P1F3 81 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 COPZ2Q9P299 210 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CFAP97Q9P2B7 532 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 KIF25Q9UIL4 384 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 PNMA8BQ9ULN7 279 aaPredicted RBP3.2□□□□□ -1.9
SEC23A-207ENST00000554615 ENTPD2Q9Y5L3 495 aa3.2□□□□□ -1.9
SEC23A-207ENST00000554615 CHD9Q3L8U1 2897 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TANC2Q9HCD6 1990 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 A0A1W2PQF6 199 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 LRRC72A6NJI9 287 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HMSDA8MTL9 139 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 J3KTA2 159 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 PDPK1O15530 556 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RNF13O43567 381 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HS6ST1O60243 411 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 LCMT2O60294 686 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 UPK3AO75631 287 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 B3GALNT1O75752 331 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 H1F0P07305 194 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ACP5P13686 325 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 HIST1H1TP22492 207 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 AHCYP23526 432 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 UCP1P25874 307 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ETV3P41162 512 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 MAGEA10P43363 369 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CCR8P51685 355 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SUCLG1P53597 346 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TAS2R43P59537 309 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CDC42P60953 191 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 RPS15AP62244 130 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 YPEL5P62699 121 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 SNRPNP63162 240 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 DEFB103AP81534 67 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 KIR2DS3Q14952 304 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 MAPK14Q16539 360 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GPAT3Q53EU6 434 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 NHLRC3Q5JS37 347 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 TMEM240Q5SV17 173 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GPR139Q6DWJ6 353 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 LIN54Q6MZP7 749 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ZC3H14Q6PJT7 736 aaKnown RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF767PQ75MW2 155 aa3.19□□□□□ -1.9
SEC23A-207ENST00000554615 CHST15Q7LFX5 561 aaPredicted RBP3.19□□□□□ -1.9
SEC23A-207ENST00000554615 GDF7Q7Z4P5 450 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms