RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 NUDT2P50583 147 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 MANFP55145 182 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 NCALDP61601 193 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 SLC25A3Q00325 362 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 LRRC74AQ0VAA2 488 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 HSPB3Q12988 150 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 NFYCQ13952 458 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 SERTAD2Q14140 314 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 PRICKLE4Q2TBC4 344 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 RTL4Q6ZR62 310 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 CCDC121Q6ZUS5 278 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 LIX1LQ8IVB5 337 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 ST13P4Q8IZP2 240 aaPredicted RBP12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 CLEC4FQ8N1N0 589 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 FAM109AQ8N4B1 249 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 TMEM251Q8N6I4 163 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 VPS37AQ8NEZ2 397 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 ADCY4Q8NFM4 1077 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 ZNF675Q8TD23 568 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 DOK4Q8TEW6 326 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 DAZLQ92904 295 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 PPWD1Q96BP3 646 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 CTHRC1Q96CG8 243 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 LRRC58Q96CX6 371 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 SLC39A3Q9BRY0 314 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 POLDIP3Q9BY77 421 aaKnown RBP12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 LDAHQ9H6V9 325 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 ALKBH4Q9NXW9 302 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 TAS2R9Q9NYW1 312 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 TAS2R1Q9NYW7 299 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 MAT2BQ9NZL9 334 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 ACAD8Q9UKU7 415 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 PCDHB14Q9Y5E9 798 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 FAM215AQ9Y5M1 114 aa12.85□□□□□ -0.35
SPTLC2-202ENST00000554365 INTS1Q8N201 2190 aaKnown RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 A0A0G2JNJ9 132 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 PLOD2O00469 737 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ERN1O75460 977 aaKnown RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 GLSO94925 669 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 KCNH1O95259 989 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 NPPAP01160 153 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 IGHG3P01860 377 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ABCB1P08183 1280 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 CELA3AP09093 270 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 TNNI3P19429 210 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 S1PR1P21453 382 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 GALNSP34059 522 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 MPIP34949 423 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 DNASE1L1P49184 302 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 MAN2A2P49641 1150 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 DLX5P56178 289 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 STX4Q12846 297 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 SNTB1Q13884 538 aaKnown RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 CAPRIN1Q14444 709 aaKnown RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 RUNDC3AQ59EK9 446 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 C6orf10Q5SRN2 563 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 RTL6Q6ICC9 239 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 FAM111BQ6SJ93 734 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 TRILQ7L0X0 811 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 WDR53Q7Z5U6 358 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 TGIF2LYQ8IUE0 185 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ZZZ3Q8IYH5 903 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ZNF321PQ8N8H1 164 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 PCYOX1LQ8NBM8 494 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 MORN4Q8NDC4 146 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 SIMC1Q8NDZ2 872 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 CHDHQ8NE62 594 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 OR7G2Q8NG99 324 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ZFP28Q8NHY6 868 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 PTPMT1Q8WUK0 201 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 KAT2AQ92830 837 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ROPN1LQ96C74 230 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ELP4Q96EB1 424 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 PANX1Q96RD7 426 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 CGREF1Q99674 301 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 FOXC2Q99958 501 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 CPPED1Q9BRF8 314 aaPredicted RBP12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 OR8D2Q9GZM6 311 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 C1orf21Q9H246 121 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 EXO5Q9H790 373 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 CXorf21Q9HAI6 301 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 NEUROD4Q9HD90 331 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 SACM1LQ9NTJ5 587 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 NTMQ9P121 344 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 Q9UFV3 132 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 ZNF639Q9UID6 485 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 GMEB1Q9Y692 573 aa12.84□□□□□ -0.35
SPTLC2-202ENST00000554365 PHF3Q92576 2039 aaKnown RBP12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ITPR3Q14573 2671 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 SYNDIG1LA6NDD5 238 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 HRKO00198 91 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 AQP7O14520 342 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 CTAG2O75638 210 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ATP5HO75947 161 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 CLPSP04118 112 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 P04436 131 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms