RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CSO75390 466 aaKnown RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 PRAMEF12O95522 483 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 IGHG3P01860 377 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SLC4A1P02730 911 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ALPPP05187 535 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ABHD2P08910 425 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SNRPCP09234 159 aaKnown RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 P0C879 139 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ALPPL2P10696 532 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 PRPHP41219 470 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ASMTP46597 345 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SMSP52788 366 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 NDST1P52848 882 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 CASP9P55211 416 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 RPL27P61353 136 aaKnown RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 PAX2Q02962 417 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 MFGE8Q08431 387 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 PDK1Q15118 436 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SGCBQ16585 318 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 PRAMEF8Q5VWM4 474 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 GCNT7Q6ZNI0 430 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 RBM43Q6ZSC3 357 aaKnown RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 CYP4V2Q6ZWL3 525 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 USP50Q70EL3 339 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF410Q86VK4 478 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 C17orf64Q86WR6 236 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 CNPY4Q8N129 248 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 KDM8Q8N371 416 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 CCNYQ8ND76 341 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 EXOC6Q8TAG9 804 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 GOLGA5Q8TBA6 731 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 URGCPQ8TCY9 931 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SAP25Q8TEE9 199 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 MRPL24Q96A35 216 aaKnown RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SNRNP40Q96DI7 357 aaKnown RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF285Q96NJ3 590 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF559Q9BR84 538 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 TTYH2Q9BSA4 534 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SYTL2Q9HCH5 934 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 PRMT8Q9NR22 394 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ZNF446Q9NWS9 450 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 PLEK2Q9NYT0 353 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 ACTR3BQ9P1U1 418 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 RCOR3Q9P2K3 495 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-210ENST00000553693 MLXQ9UH92 298 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 CIDEBQ9UHD4 219 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 TEKT2Q9UIF3 430 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 SH3BGRL2Q9UJC5 107 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 COL4A5P29400 1685 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 CACNA1SQ13698 1873 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 A0A0C4DFX4 3053 aa2.68□□□□□ -1.98
SCFD1-210ENST00000553693 IGHV3OR16-12A0A075B7B8 117 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 A0A0A6YYC8 382 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 IGHV3-35A0A0C4DH35 117 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 FRG2CA6NGY1 282 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 I3L1I5 382 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 VEGFDO43915 354 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 GUCA1CO95843 209 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 HOXC4P09017 264 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 AREGP15514 252 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 AHCYP23526 432 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 STIP1P31948 543 aaKnown RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 TNNT2P45379 298 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 ATXN3P54252 364 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 WNT4P56705 351 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 HMGN5P82970 282 aaKnown RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 KRT31Q15323 416 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 STXBP2Q15833 593 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 MICAQ29983 383 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 KCTD11Q693B1 232 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 SNRNP48Q6IEG0 339 aaKnown RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 CAPN13Q6MZZ7 669 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 PODNL1Q6PEZ8 512 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 MFSD7Q6UXD7 560 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 B3GLCTQ6Y288 498 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 PRSS42Q7Z5A4 293 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 SERPINA12Q8IW75 414 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 CNTN4Q8IWV2 1026 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 CCDC197Q8NCU1 140 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 BCL2L2Q92843 193 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 RASL10BQ96S79 203 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 NACA2Q9H009 215 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 WWP1Q9H0M0 922 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 POLE3Q9NRF9 147 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 MRPL17Q9NRX2 175 aaKnown RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 DNAJC11Q9NVH1 559 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 CYP39A1Q9NYL5 469 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 SEC14L4Q9UDX3 406 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 ABCG2Q9UNQ0 655 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 PIN4Q9Y237 131 aaKnown RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 RPH3AQ9Y2J0 694 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 MKI67P46013 3256 aaKnown RBP2.67□□□□□ -1.98
SCFD1-210ENST00000553693 TRPM7Q96QT4 1865 aa2.67□□□□□ -1.98
SCFD1-210ENST00000553693 CFAP73A6NFT4 308 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 EFCAB7A8K855 629 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 ANXA9O76027 345 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 IGKV3-11P04433 115 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 SFTPBP07988 381 aa2.66□□□□□ -1.98
SCFD1-210ENST00000553693 EZRP15311 586 aaKnown RBP2.66□□□□□ -1.98
SCFD1-210ENST00000553693 UGT1A6P19224 532 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms