RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 STX5Q13190 355 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 PPA1Q15181 289 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 STK11Q15831 433 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 TMEM201Q5SNT2 666 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 Q6ZSR9 355 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 BHLHA15Q7RTS1 189 aaPredicted RBP12.23□□□□□ -0.45
PRPF39-204ENST00000553605 WDR75Q8IWA0 830 aaKnown RBP12.23□□□□□ -0.45
PRPF39-204ENST00000553605 RNF214Q8ND24 703 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 UHMK1Q8TAS1 419 aaKnown RBP12.23□□□□□ -0.45
PRPF39-204ENST00000553605 DUSP19Q8WTR2 217 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 EXT2Q93063 718 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 NXNL1Q96CM4 212 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 SAYSD1Q9NPB0 183 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 OPTCQ9UBM4 332 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 TMEFF2Q9UIK5 374 aaPredicted RBP12.23□□□□□ -0.45
PRPF39-204ENST00000553605 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 POU2F3Q9UKI9 436 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 CES1P1Q9UKY3 287 aa12.23□□□□□ -0.45
PRPF39-204ENST00000553605 PCNX3Q9H6A9 2034 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 ESYT3A0FGR9 886 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 K7EPI3 171 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 FADS1O60427 444 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 NME6O75414 186 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-204ENST00000553605 BMP4P12644 408 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 CD1DP15813 335 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 PCSK2P16519 638 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 SLC12A2P55011 1212 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 PSPHP78330 225 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 MRPS35P82673 323 aaKnown RBP12.22□□□□□ -0.45
PRPF39-204ENST00000553605 LTB4RQ15722 352 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 PDCD2Q16342 344 aaPredicted RBP12.22□□□□□ -0.45
PRPF39-204ENST00000553605 TMEM44Q2T9K0 475 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 IQCCQ4KMZ1 466 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 LIPJQ5W064 366 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 SLC48A1Q6P1K1 146 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 NUFIP2Q7Z417 695 aaKnown RBP12.22□□□□□ -0.45
PRPF39-204ENST00000553605 MAGOHBQ96A72 148 aaKnown RBP12.22□□□□□ -0.45
PRPF39-204ENST00000553605 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 CFAP36Q96G28 342 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 ADGRG7Q96K78 797 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 SOX7Q9BT81 388 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 RTN4RQ9BZR6 473 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 GUCA1BQ9UMX6 200 aa12.22□□□□□ -0.45
PRPF39-204ENST00000553605 TRRAPQ9Y4A5 3859 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 GOLGA8QA0A0J9YX86 632 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 C1orf226A1L170 272 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 GOLGA8OA6NCC3 632 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 FAM157AC9JC47 383 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 GOLGA8NF8WBI6 632 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 H0YIV9 168 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 GOLGA8RI6L899 631 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 TNFSF11O14788 317 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 ADAMDEC1O15204 470 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 BCAS2O75934 225 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-204ENST00000553605 WISP3O95389 354 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-204ENST00000553605 OPN1LWP04000 364 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 KLK1P06870 262 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 COL6A2P12110 1019 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 ATP6V0D1P61421 351 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 DUSP2Q05923 314 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 HP1BP3Q5SSJ5 553 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-204ENST00000553605 RNASEH2BQ5TBB1 312 aaKnown RBP12.21□□□□□ -0.45
PRPF39-204ENST00000553605 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 NPSR1Q6W5P4 371 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 CEP112Q8N8E3 955 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 OR4N2Q8NGD1 307 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 OR2W6PQ8NHA6 318 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 FOXN4Q96NZ1 517 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 BAG1Q99933 345 aaPredicted RBP12.21□□□□□ -0.45
PRPF39-204ENST00000553605 ZNF696Q9H7X3 374 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 ANKRA2Q9H9E1 313 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 NPAP1Q9NZP6 1156 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 MGAT4BQ9UQ53 548 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 ZNF281Q9Y2X9 895 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 PCDHA9Q9Y5H5 950 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 PMF1-BGLAPU3KQ54 211 aa12.21□□□□□ -0.45
PRPF39-204ENST00000553605 FOXE1O00358 373 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-204ENST00000553605 GMFGO60234 142 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 LYZL6O75951 148 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 PABPC4LP0CB38 370 aaKnown RBP12.2□□□□□ -0.46
PRPF39-204ENST00000553605 ZNF23P17027 643 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 CXCR5P32302 372 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 CHRNB3Q05901 458 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 CPSF6Q16630 551 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRPF39-204ENST00000553605 CCNYL2Q5T2Q4 361 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 FAM180BQ6P0A1 224 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 TMEM108Q6UXF1 575 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 ESPNLQ6ZVH7 1005 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 SSX8Q7RTT4 187 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 TBC1D1Q86TI0 1168 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-204ENST00000553605 SLC44A2Q8IWA5 706 aaPredicted RBP12.2□□□□□ -0.46
PRPF39-204ENST00000553605 TUSC5Q8IXB3 177 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 TEX9Q8N6V9 391 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 KCTD4Q8WVF5 259 aa12.2□□□□□ -0.46
PRPF39-204ENST00000553605 VSTM2LQ96N03 204 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms