RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TMPRSS11AQ6ZMR5 421 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 PRR23CQ6ZRP0 262 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 RANBP3LQ86VV4 465 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-205ENST00000553474 VRK2Q86Y07 508 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 KCT2Q8NC54 265 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 OR7G2Q8NG99 324 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 FLVCR1-AS1Q8TAF5 88 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 KIAA1143Q96AT1 154 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-205ENST00000553474 SLC41A3Q96GZ6 507 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 STACQ99469 402 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 ARHGAP9Q9BRR9 750 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 PLA2G12AQ9BZM1 189 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 PIGUQ9H490 435 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 EQTNQ9NQ60 294 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 POLE3Q9NRF9 147 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 DUSP22Q9NRW4 184 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 SEMA4GQ9NTN9 838 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF624Q9P2J8 865 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-205ENST00000553474 C19orf53Q9UNZ5 99 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-205ENST00000553474 GRIP1Q9Y3R0 1128 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 SLC22A7Q9Y694 548 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 POM121BA6NF01 834 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CPSF4LA6NMK7 179 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CTDSP2O14595 271 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 ATP1B1P05026 303 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 DBIP07108 87 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 RPS4Y1P22090 263 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CFL1P23528 166 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 SEPHS1P49903 392 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 MRPS21P82921 87 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 EXOSC6Q5RKV6 272 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 ARMC4Q5T2S8 1044 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 NXNL2Q5VZ03 156 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PRICKLE2Q7Z3G6 844 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 WDR53Q7Z5U6 358 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 FAM181AQ8N9Y4 354 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PSD4Q8NDX1 1056 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 OR2T33Q8NG76 320 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 SLC9A6Q92581 669 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 OR2A14Q96R47 310 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 MCHR1Q99705 422 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF350Q9GZX5 532 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 QRSL1Q9H0R6 528 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 FN3KQ9H479 309 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 EGLN3Q9H6Z9 239 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 POLE4Q9NR33 117 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 EXOGQ9Y2C4 368 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CMAHPQ9Y471 501 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CHST2Q9Y4C5 530 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PCDHGB2Q9Y5G2 931 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 SPIN1Q9Y657 262 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CDH10Q9Y6N8 788 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 SURF4O15260 269 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 RGS5O15539 181 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 AKAP8O43823 692 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PLOD3O60568 738 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 STX11O75558 287 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 STATHP02808 62 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 GUSBP08236 651 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CPMP14384 443 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 NDUFV2P19404 249 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 DRD1P21728 446 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 GTF2E2P29084 291 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CTHP32929 405 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 ACTR1BP42025 376 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 AVPR1BP47901 424 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PDX1P52945 283 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CDH11P55287 796 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 ACTR1AP61163 376 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PPP2CBP62714 309 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PPP2CAP67775 309 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 BDH1Q02338 343 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 DOC2BQ14184 412 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 AADACL4Q5VUY2 407 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 TYW3Q6IPR3 259 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 FAM111BQ6SJ93 734 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF620Q6ZNG0 422 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 GDF7Q7Z4P5 450 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 BCDIN3DQ7Z5W3 292 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 AKAP14Q86UN6 197 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 GID4Q8IVV7 300 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 CDRT4Q8N9R6 151 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 SLC16A11Q8NCK7 471 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 FAM83FQ8NEG4 500 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 OR8D4Q8NGM9 314 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 OR52N1Q8NH53 320 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 HTRA1Q92743 480 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 KAT2AQ92830 837 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 HPS1Q92902 700 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 RERGQ96A58 199 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 FAM46AQ96IP4 442 aaKnown RBP12.05□□□□□ -0.48
SHMT2-205ENST00000553474 ZFYVE21Q9BQ24 234 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 KCNS3Q9BQ31 491 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 BARHL1Q9BZE3 327 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 SYNPO2LQ9H987 977 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 SLC2A4RGQ9NR83 387 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 PILRAQ9UKJ1 303 aa12.05□□□□□ -0.48
SHMT2-205ENST00000553474 FANCMQ8IYD8 2048 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 TRDV1A0A1B0GX56 115 aa12.04□□□□□ -0.48
SHMT2-205ENST00000553474 TRAPPC13A5PLN9 417 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms