RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 EIPR1Q53HC9 387 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 C1orf185Q5T7R7 199 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 ENPP6Q6UWR7 440 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 YRDCQ86U90 279 aaKnown RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 WDR75Q8IWA0 830 aaKnown RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 COX18Q8N8Q8 333 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 SLC16A11Q8NCK7 471 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 OR4K17Q8NGC6 315 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 OR10Q1Q8NGQ4 319 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 OR14L1PQ8NHC6 308 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 PIWIL2Q8TC59 973 aaKnown RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 FAM110BQ8TC76 370 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 ADAMTS15Q8TE58 950 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 PIK3R3Q92569 461 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 JADE3Q92613 823 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 RMND5BQ96G75 393 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 TTYH2Q9BSA4 534 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 BTBD2Q9BX70 525 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 ACTRT3Q9BYD9 372 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 OR2B2Q9GZK3 357 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 PRDM14Q9GZV8 571 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 PIGUQ9H490 435 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 PTGES2Q9H7Z7 377 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 TAS2R10Q9NYW0 307 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 TNFRSF10DQ9UBN6 386 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 GXYLT2A0PJZ3 443 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 DUXAA6NLW8 204 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 SDHDO14521 159 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 HNRNPRO43390 633 aaKnown RBP13.96□□□□□ -0.17
SHMT2-204ENST00000553324 KCNK2O95069 426 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 NGFRP08138 427 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 HPGDP15428 266 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 H2AFXP16104 143 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-204ENST00000553324 BMP7P18075 431 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 COL8A1P27658 744 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 HBA1P69905 142 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 LRRC74AQ0VAA2 488 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 GANABQ14697 944 aaKnown RBP13.96□□□□□ -0.17
SHMT2-204ENST00000553324 DUSP5Q16690 384 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 WIPI1Q5MNZ9 446 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-204ENST00000553324 OR5M10Q6IEU7 315 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 CDC73Q6P1J9 531 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 IFNEQ86WN2 208 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 ULK2Q8IYT8 1036 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 MARVELD2Q8N4S9 558 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 LILRB4Q8NHJ6 448 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 CHMP6Q96FZ7 201 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 C16orf58Q96GQ5 468 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 SH3GL2Q99962 352 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 CXorf36Q9H7Y0 433 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 UBQLN4Q9NRR5 601 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 DKKL1Q9UK85 242 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 SLC6A5Q9Y345 797 aa13.96□□□□□ -0.17
SHMT2-204ENST00000553324 EML6Q6ZMW3 1958 aa13.96□□□□□ -0.18
SHMT2-204ENST00000553324 UTP20O75691 2785 aaKnown RBP13.95□□□□□ -0.18
SHMT2-204ENST00000553324 ZNF407Q9C0G0 2248 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 LINC01387J3KSC0 135 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 SCO2O43819 266 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 EPPINO95925 133 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 GLI4P10075 376 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 ACP2P11117 423 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 CPN1P15169 458 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 TBXA2RP21731 343 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 CHMP24386 653 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 DPP4P27487 766 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 EPHA3P29320 983 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 DCTP40126 519 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 NUP107P57740 925 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 POU6F2P78424 691 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-204ENST00000553324 EXOSC6Q5RKV6 272 aaKnown RBP13.95□□□□□ -0.18
SHMT2-204ENST00000553324 RIPPLY2Q5TAB7 128 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 RTL6Q6ICC9 239 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 OR4F3Q6IEY1 312 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 MISPQ8IVT2 679 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 FADS6Q8N9I5 356 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 GLB1L3Q8NCI6 653 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-204ENST00000553324 GOT1L1Q8NHS2 421 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-204ENST00000553324 LRRC8CQ8TDW0 803 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 ACTRT2Q8TDY3 377 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 DUSP19Q8WTR2 217 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 DYDC1Q8WWB3 177 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 ZBTB18Q99592 522 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 YIPF4Q9BSR8 244 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 UGT2B28Q9BY64 529 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 HOXD1Q9GZZ0 328 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 MARCOQ9UEW3 520 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-204ENST00000553324 FBXL2Q9UKC9 423 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 RNF6Q9Y252 685 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 FAM215AQ9Y5M1 114 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 DNAJC13O75165 2243 aa13.95□□□□□ -0.18
SHMT2-204ENST00000553324 HSPB2A8KAH6 182 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 ALG1L2C9J202 215 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 E9PBE3 544 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 SCDO00767 359 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 ANKRD28O15084 1053 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 NDUFB5O43674 189 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 ZIC3O60481 467 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 TGDSO95455 350 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms