RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 CCDC116Q8IYX3 515 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 ZBED8Q8IZ13 594 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 CENPLQ8N0S6 344 aaPredicted RBP7.55□□□□□ -1.2
CDK4-213ENST00000552713 METTL4Q8N3J2 472 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 GBP7Q8N8V2 638 aaPredicted RBP7.55□□□□□ -1.2
CDK4-213ENST00000552713 OR52B6Q8NGF0 335 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 OR9A2Q8NGT5 310 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 OR10D3Q8NH80 312 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 DUSP19Q8WTR2 217 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 KCTD4Q8WVF5 259 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 ROBO4Q8WZ75 1007 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 C1GALT1C1Q96EU7 318 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 GMPPAQ96IJ6 420 aaPredicted RBP7.55□□□□□ -1.2
CDK4-213ENST00000552713 ADGRG7Q96K78 797 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 HS6ST2Q96MM7 605 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 HBEGFQ99075 208 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 KLHDC3Q9BQ90 382 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 RHNO1Q9BSD3 238 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 TRIM31Q9BZY9 425 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 AMBRA1Q9C0C7 1298 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 SHARPINQ9H0F6 387 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 STMN4Q9H169 189 aaPredicted RBP7.55□□□□□ -1.2
CDK4-213ENST00000552713 LRTM1Q9HBL6 345 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 SAYSD1Q9NPB0 183 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 FARSBQ9NSD9 589 aaKnown RBP7.55□□□□□ -1.2
CDK4-213ENST00000552713 TMEM160Q9NX00 188 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 ADAM29Q9UKF5 820 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 GPR52Q9Y2T5 361 aa7.55□□□□□ -1.2
CDK4-213ENST00000552713 UQCRHLA0A096LP55 91 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 GOLGA6L10A0A0M3HER8 536 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 TCRBV9S1A1TA0A576 114 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 SHISA9B4DS77 424 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 CXCL13O43927 109 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 UGDHO60701 494 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 SEC31AO94979 1220 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 PLGP00747 810 aaPredicted RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 LTA4HP09960 611 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 FCGR2AP12318 317 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 AGTR1P30556 359 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 GP5P40197 560 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 ALDH9A1P49189 494 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 RPS3AP61247 264 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 MRPS25P82663 173 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 PSG6Q00889 435 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 LOXL1Q08397 574 aaPredicted RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 SGO1Q5FBB7 561 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 FRG2Q64ET8 278 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 APOOLQ6UXV4 268 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 DNAJC14Q6Y2X3 702 aaPredicted RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 RPS27LQ71UM5 84 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 NUFIP2Q7Z417 695 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 GALNT10Q86SR1 603 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 DTX2Q86UW9 622 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 GABRG1Q8N1C3 465 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 C17orf53Q8N3J3 647 aaPredicted RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 ZNF525Q8N782 197 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 OR7G2Q8NG99 324 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 UHMK1Q8TAS1 419 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 ZNF675Q8TD23 568 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 ANP32BQ92688 251 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 GFM2Q969S9 779 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 C1orf159Q96HA4 380 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 NSUN5Q96P11 429 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 FRG2BQ96QU4 278 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 CPNE1Q99829 537 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 TACO1Q9BSH4 297 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 PRRG4Q9BZD6 226 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 PLA2G12AQ9BZM1 189 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 OR10A4Q9H209 315 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 ESRP2Q9H6T0 727 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 NOL11Q9H8H0 719 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 MANSC1Q9H8J5 431 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 NMRAL1Q9HBL8 299 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 FBXO34Q9NWN3 711 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 CISD1Q9NZ45 108 aaKnown RBP7.54□□□□□ -1.2
CDK4-213ENST00000552713 ACOT9Q9Y305 439 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 AP4B1Q9Y6B7 739 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 SVEP1Q4LDE5 3571 aa7.54□□□□□ -1.2
CDK4-213ENST00000552713 A0A0J9YW62 118 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 FAM159BA6NKW6 160 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 ELOA3DA6NLF2 546 aaPredicted RBP7.53□□□□□ -1.2
CDK4-213ENST00000552713 LINC01387J3KSC0 135 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 TNFSF11O14788 317 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 LMX1BO60663 402 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 CLDN9O95484 217 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 ALDOAP04075 364 aaKnown RBP7.53□□□□□ -1.2
CDK4-213ENST00000552713 GFAPP14136 432 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 SRD5A1P18405 259 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 ADH6P28332 368 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 THBS2P35442 1172 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 KRT20P35900 424 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 NUDT6P53370 316 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 ALDH18A1P54886 795 aaKnown RBP7.53□□□□□ -1.2
CDK4-213ENST00000552713 TRAF3Q13114 568 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 GANABQ14697 944 aaKnown RBP7.53□□□□□ -1.2
CDK4-213ENST00000552713 PRSS53Q2L4Q9 553 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 ELOA3BQ3SY89 546 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 SH2D4BQ5SQS7 431 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 SFRP5Q5T4F7 317 aa7.53□□□□□ -1.2
CDK4-213ENST00000552713 C11orf71Q6IPW1 123 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms