RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 RIN1Q13671 783 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 THOC5Q13769 683 aaKnown RBP11.74□□□□□ -0.53
SNRPF-203ENST00000551316 LTB4RQ15722 352 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 BEAN1Q3B7T3 259 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 VAX1Q5SQQ9 334 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 TIMM23BQ5SRD1 257 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 KHDRBS2Q5VWX1 349 aaKnown RBP11.74□□□□□ -0.53
SNRPF-203ENST00000551316 ANKRD22Q5VYY1 191 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 LEG1Q6P5S2 330 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 TMEM108Q6UXF1 575 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 GBP7Q8N8V2 638 aaPredicted RBP11.74□□□□□ -0.53
SNRPF-203ENST00000551316 OR4N2Q8NGD1 307 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 RNF217Q8TC41 542 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 C1orf54Q8WWF1 131 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 LRRC58Q96CX6 371 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 TMCO6Q96DC7 493 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 MYOZ1Q9NP98 299 aaPredicted RBP11.74□□□□□ -0.53
SNRPF-203ENST00000551316 IARS2Q9NSE4 1012 aaKnown RBP11.74□□□□□ -0.53
SNRPF-203ENST00000551316 TAS2R13Q9NYV9 303 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 BCAP29Q9UHQ4 241 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 ZNF639Q9UID6 485 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 PHF11Q9UIL8 331 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
SNRPF-203ENST00000551316 OR5H1A6NKK0 313 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 G3V4G9 280 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 TO15178 435 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 SHOX2O60902 331 aaPredicted RBP11.73□□□□□ -0.53
SNRPF-203ENST00000551316 RAD51DO75771 328 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 PGM3O95394 542 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 GBAP04062 536 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 MSMBP08118 114 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 IGFBP1P08833 259 aaPredicted RBP11.73□□□□□ -0.53
SNRPF-203ENST00000551316 PCMT1P22061 227 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 OMGP23515 440 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 PTAFRP25105 342 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 APOBEC3AP31941 199 aaPredicted RBP11.73□□□□□ -0.53
SNRPF-203ENST00000551316 EVI2BP34910 448 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 EMDP50402 254 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 IL2P60568 153 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 CHRNEQ04844 493 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 ACAP2Q15057 778 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 ZNF239Q16600 458 aaKnown RBP11.73□□□□□ -0.53
SNRPF-203ENST00000551316 PRICKLE4Q2TBC4 344 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 HSP90AA5PQ58FG0 334 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 ZNF628Q5EBL2 1059 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 Q6ZT83 130 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 C1QL2Q7Z5L3 287 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 OR7G1Q8NGA0 311 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 OR52R1Q8NGF1 315 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 OR2V1Q8NHB1 315 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 CLDND2Q8NHS1 167 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 WDR34Q96EX3 536 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 CCDC42Q96M95 316 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 EGFL8Q99944 293 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 TMPRSS13Q9BYE2 586 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 TRIM54Q9BYV2 358 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 SAP130Q9H0E3 1048 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 G6PC2Q9NQR9 355 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 GLRX2Q9NS18 164 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 ABHD10Q9NUJ1 306 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 PAK5Q9P286 719 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 MOKQ9UQ07 419 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 MGAT4BQ9UQ53 548 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 VDAC3Q9Y277 283 aa11.73□□□□□ -0.53
SNRPF-203ENST00000551316 NCF1BA6NI72 391 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 NCF1CA8MVU1 366 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 CLGNO14967 610 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 SYNGR4O95473 234 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 CT45A8P0DMV1 189 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 CT45A9P0DMV2 189 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 NCF1P14598 390 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 DAOP14920 347 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 HPDP32754 393 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 FOXG1P55316 489 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 MRPS35P82673 323 aaKnown RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 ZNF460Q14592 562 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 MLC1Q15049 377 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 TRMT12Q53H54 448 aaKnown RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 CT45A2Q5DJT8 189 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 FAM180BQ6P0A1 224 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 FAHD2BQ6P2I3 314 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 CCBE1Q6UXH8 406 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 SLC46A3Q7Z3Q1 461 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 ZCCHC7Q8N3Z6 543 aaKnown RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 ZNF540Q8NDQ6 660 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 MUCL1Q96DR8 90 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 PTCD3Q96EY7 689 aaKnown RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 FAHD2AQ96GK7 314 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 CCT8L2Q96SF2 557 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 BRINP2Q9C0B6 783 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 CXorf36Q9H7Y0 433 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 MYNNQ9NPC7 610 aa11.72□□□□□ -0.53
SNRPF-203ENST00000551316 C20orf96Q9NUD7 363 aaPredicted RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 DDX28Q9NUL7 540 aaKnown RBP11.72□□□□□ -0.53
SNRPF-203ENST00000551316 LMBRD1Q9NUN5 540 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms