RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 METTL6Q8TCB7 284 aa13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 C1GALT1C1Q96EU7 318 aa13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 FUT8Q9BYC5 575 aa13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 CDC42EP4Q9H3Q1 356 aaKnown RBP13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 SDHAF3Q9NRP4 125 aa13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 ZNF175Q9Y473 711 aa13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 TIMM22Q9Y584 194 aa13.3□□□□□ -0.28
TMEM106C-216ENST00000551305 OPN1LWP04000 364 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 TIA1P31483 386 aaKnown RBP eCLIP13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 MPIP34949 423 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 SERPINB9P50453 376 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 NCBP2P52298 156 aaKnown RBP eCLIP13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 PSPHP78330 225 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 ACSM2AQ08AH3 577 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 C2orf80Q0P641 193 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 CAPRIN1Q14444 709 aaKnown RBP13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 GANABQ14697 944 aaKnown RBP13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 RASA2Q15283 850 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 CYP27C1Q4G0S4 372 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 ZNF678Q5SXM1 525 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 ACSM2BQ68CK6 577 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 APOOLQ6UXV4 268 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 ZNF704Q6ZNC4 412 aaPredicted RBP13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 GPRIN3Q6ZVF9 776 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 FAM214BQ7L5A3 538 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 GGNQ86UU5 652 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 SAMD14Q8IZD0 417 aaPredicted RBP13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 METTL25Q8N6Q8 603 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 CDC26Q8NHZ8 85 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 DCAKDQ8WVC6 231 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 TMEM237Q96Q45 408 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 KCNA7Q96RP8 456 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 STMN4Q9H169 189 aaPredicted RBP13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 PTGES2Q9H7Z7 377 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 PLSCR4Q9NRQ2 329 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 TMEM216Q9P0N5 145 aa13.29□□□□□ -0.28
TMEM106C-216ENST00000551305 CSPG4Q6UVK1 2322 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 MYO1GB0I1T2 1018 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 UPK1AO00322 258 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 DLX3O60479 287 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 COQ9O75208 318 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 ANXA4P09525 319 aaPredicted RBP13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 HMOX2P30519 316 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 EIF1AXP47813 144 aaKnown RBP13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 RPS3AP61247 264 aaKnown RBP13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 FGFBP1Q14512 234 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 DECR1Q16698 335 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 BEX5Q5H9J7 111 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 SYT10Q6XYQ8 523 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 SH2D5Q6ZV89 423 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 CXXC5Q7LFL8 322 aaKnown RBP13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 WFDC8Q8IUA0 241 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 MAPK1IP1LQ8NDC0 245 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 C11orf24Q96F05 449 aaPredicted RBP13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 PLPPR2Q96GM1 343 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 ZNF382Q96SR6 550 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 NPAS1Q99742 590 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 PRRG4Q9BZD6 226 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 GLIPR2Q9H4G4 154 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 FAM120CQ9NX05 1096 aaKnown RBP13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 ABCG2Q9UNQ0 655 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 C19orf53Q9UNZ5 99 aaPredicted RBP13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 AP4B1Q9Y6B7 739 aa13.28□□□□□ -0.28
TMEM106C-216ENST00000551305 GXYLT2A0PJZ3 443 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 LINC01387J3KSC0 135 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 EIF1AYO14602 144 aaKnown RBP13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 UTS2O95399 124 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 IL33O95760 270 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 IGKV1D-16P01601 117 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 PAX1P15863 534 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 DDCP20711 480 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 ATP5J2P56134 94 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 TNK1Q13470 666 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 TMEM44Q2T9K0 475 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 GLYR1Q49A26 553 aaPredicted RBP13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 C8orf74Q6P047 294 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 STAC2Q6ZMT1 411 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNF572Q7Z3I7 529 aaPredicted RBP13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 RELL1Q8IUW5 271 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 TMEM171Q8WVE6 324 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 CAVIN3Q969G5 261 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 GFM2Q969S9 779 aaKnown RBP13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 ZNF701Q9NV72 531 aaPredicted RBP13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 VDAC3Q9Y277 283 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 HIVEP2P31629 2446 aa13.27□□□□□ -0.29
TMEM106C-216ENST00000551305 A0A087WV62 115 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 UQCRHLA0A096LP55 91 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 PSMG1O95456 288 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 ANGPTL1O95841 491 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 PLGP00747 810 aaPredicted RBP13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 TAC1P20366 129 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 GABRA3P34903 492 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 CLK3P49761 638 aaKnown RBP13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 FOXA1P55317 472 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 KRTAP1-1Q07627 177 aa13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 CTU2Q2VPK5 515 aaKnown RBP13.26□□□□□ -0.29
TMEM106C-216ENST00000551305 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms