RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 SLCO2A1Q92959 643 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 RNASE6Q93091 150 aaKnown RBP3.24□□□□□ -1.89
LIMA1-206ENST00000550611 TBC1D20Q96BZ9 403 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 CCDC42Q96M95 316 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 SMC6Q96SB8 1091 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 PIP5K1AQ99755 562 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 DPCDQ9BVM2 203 aaPredicted RBP3.24□□□□□ -1.89
LIMA1-206ENST00000550611 DEFB126Q9BYW3 111 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 TTTY12Q9BZ98 90 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 IL1RL2Q9HB29 575 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 ANKHQ9HCJ1 492 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 CHRAC1Q9NRG0 131 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 FAM114A2Q9NRY5 505 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 ABHD10Q9NUJ1 306 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 IFNKQ9P0W0 207 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 DNAJB11Q9UBS4 358 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 B4GALT7Q9UBV7 327 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 ZNF629Q9UEG4 869 aaPredicted RBP3.24□□□□□ -1.89
LIMA1-206ENST00000550611 USP22Q9UPT9 525 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 YARS2Q9Y2Z4 477 aaKnown RBP3.24□□□□□ -1.89
LIMA1-206ENST00000550611 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.24□□□□□ -1.89
LIMA1-206ENST00000550611 LIPGQ9Y5X9 500 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 DYSFO75923 2080 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 VWFP04275 2813 aa3.24□□□□□ -1.89
LIMA1-206ENST00000550611 SNRNP200O75643 2136 aaKnown RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 MPDZO75970 2070 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 TRBV11-1A0A0K0K1C0 115 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 CTAGE15A4D2H0 777 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ZNF860A6NHJ4 632 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 HSPB2A8KAH6 182 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 FAM166BA8MTA8 275 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 KDM4EB2RXH2 506 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 H3BNX3 289 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 J3KTA2 159 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ZNF354AO60765 605 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 B4GALT2O60909 372 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 NDUFS3O75489 264 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ZFAND5O76080 213 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 OR6B1O95007 311 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 EPPINO95925 133 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 IFNA2P01563 188 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 CATP04040 527 aaKnown RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 NPSP0C0P6 89 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 MPC1LP0DKB6 136 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 PSG1P11464 419 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 GABRA1P14867 456 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ALOX12P18054 663 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 MAOAP21397 527 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 JAK1P23458 1154 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 NMBRP28336 390 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 EPHA3P29320 983 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 UQCRC1P31930 480 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 TIMP3P35625 211 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 SERPINF1P36955 418 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 FDFT1P37268 417 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 CDKN2AP42771 156 aaKnown RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 MAGEA1P43355 309 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 MAGEA5P43359 124 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ASCL1P50553 236 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 SSR4P51571 173 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 EIF3BP55884 814 aaKnown RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 RWDD2BP57060 319 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 SORDQ00796 357 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 TIAL1Q01085 375 aaKnown RBP eCLIP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 TBX2Q13207 712 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 CAPRIN1Q14444 709 aaKnown RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 SLC10A1Q14973 349 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 OASLQ15646 514 aaKnown RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 HSPB2Q16082 182 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 Q5PR19 223 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 WLSQ5T9L3 541 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 NIPAL1Q6NVV3 410 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ZNF549Q6P9A3 640 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 DEF8Q6ZN54 512 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 CENPUQ71F23 418 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ADCK2Q7Z695 626 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 CTAGE6Q86UF2 777 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 SLC22A16Q86VW1 577 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 SLC13A5Q86YT5 568 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 IZUMO1Q8IYV9 350 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 TMEM156Q8N614 296 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 PRELID2Q8N945 189 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 LRRC57Q8N9N7 239 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ZNF740Q8NDX6 193 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 B3GNT7Q8NFL0 401 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 TNIP2Q8NFZ5 429 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 LINC01560Q8TB33 94 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ZCCHC10Q8TBK6 192 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 NT5CQ8TCD5 201 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 UTP15Q8TED0 518 aaKnown RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 ABHD5Q8WTS1 349 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 SKA2Q8WVK7 121 aaPredicted RBP3.23□□□□□ -1.89
LIMA1-206ENST00000550611 IGFBPL1Q8WX77 278 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 NTNG2Q96CW9 530 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 R3HDM4Q96D70 268 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 PANX2Q96RD6 677 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 RASL10BQ96S79 203 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 FAM173AQ9BQD7 235 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 KIFC1Q9BW19 673 aa3.23□□□□□ -1.89
LIMA1-206ENST00000550611 TRIM5Q9C035 493 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms