RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 KCNE3Q9Y6H6 103 aa17.7■□□□□ 0.42
DDX54-207ENST00000550016 GNB5O14775 395 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 SNPHO15079 494 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 ANP32DO95626 131 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 AGR2O95994 175 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 ELAVL4P26378 380 aaKnown RBP17.69■□□□□ 0.42
DDX54-207ENST00000550016 CLK3P49761 638 aaKnown RBP17.69■□□□□ 0.42
DDX54-207ENST00000550016 GAS1P54826 345 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 RBPJQ06330 500 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 GRAMD1BQ3KR37 738 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 CCNJQ5T5M9 372 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 GALNT10Q86SR1 603 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 PRR7Q8TB68 274 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 GTF2H4Q92759 462 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 GNRHR2Q96P88 292 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 PHF12Q96QT6 1004 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 OR51I1Q9H343 314 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 ZNF703Q9H7S9 590 aaPredicted RBP17.69■□□□□ 0.42
DDX54-207ENST00000550016 SLC52A3Q9NQ40 469 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 SDHAF3Q9NRP4 125 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 PLSCR2Q9NRY7 297 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 SLC6A13Q9NSD5 602 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 FBXO34Q9NWN3 711 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 WIF1Q9Y5W5 379 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 MYO7BQ6PIF6 2116 aa17.69■□□□□ 0.42
DDX54-207ENST00000550016 CDC40O60508 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDX54-207ENST00000550016 PDE9AO76083 593 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 KRT75O95678 551 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 GDF1P27539 372 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 GYS2P54840 703 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 CASP9P55211 416 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 TXNL4AP83876 142 aaKnown RBP17.68■□□□□ 0.42
DDX54-207ENST00000550016 C6orf10Q5SRN2 563 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 DCST2Q5T1A1 773 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 SLC2A7Q6PXP3 512 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 ZAR1Q86SH2 424 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 OR4C3Q8NH37 302 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 UBQLN4Q9NRR5 601 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 MRGBPQ9NV56 204 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 EXD2Q9NVH0 621 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 C15orf41Q9Y2V0 281 aa17.68■□□□□ 0.42
DDX54-207ENST00000550016 TENM4Q6N022 2769 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 A0A096LPI6 279 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 SCO2O43819 266 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 AK1P00568 194 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 IGHG3P01860 377 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 C1QCP02747 245 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 NGFRP08138 427 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 OR12D1P0DN82 309 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 CAPN3P20807 821 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 ATP6V1C1P21283 382 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 TBXA2RP21731 343 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 PTPN6P29350 595 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 MAGEA8P43361 318 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 KHKP50053 298 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 ANXA11P50995 505 aaKnown RBP17.67■□□□□ 0.42
DDX54-207ENST00000550016 HSF1Q00613 529 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.67■□□□□ 0.42
DDX54-207ENST00000550016 ARHGAP11BQ3KRB8 267 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 ATAD3BQ5T9A4 648 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 TNFAIP8L2Q6P589 184 aaPredicted RBP17.67■□□□□ 0.42
DDX54-207ENST00000550016 DNAJC14Q6Y2X3 702 aaPredicted RBP17.67■□□□□ 0.42
DDX54-207ENST00000550016 RNF130Q86XS8 419 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 PLCZ1Q86YW0 608 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 WDSUB1Q8N9V3 476 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 CHDHQ8NE62 594 aaPredicted RBP17.67■□□□□ 0.42
DDX54-207ENST00000550016 ZFP90Q8TF47 636 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 TSPEARQ8WU66 669 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 XAGE5Q8WWM1 108 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 SDF2Q99470 211 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 TBL1XR1Q9BZK7 514 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 PAIP1Q9H074 479 aaKnown RBP17.67■□□□□ 0.42
DDX54-207ENST00000550016 UBQLN3Q9H347 655 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 ACKR4Q9NPB9 350 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 OSGIN2Q9Y236 505 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 FLNCQ14315 2725 aa17.67■□□□□ 0.42
DDX54-207ENST00000550016 A0A1B0GTH9 108 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 A0A1W2PP18 115 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 ADAM10O14672 748 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 SUSD5O60279 629 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 CBR3O75828 277 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 OXSR1O95747 527 aaPredicted RBP17.66■□□□□ 0.42
DDX54-207ENST00000550016 CELA3AP09093 270 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 CD1EP15812 388 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 LSP1P33241 339 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 SEC24CP53992 1094 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 HEPHL1Q6MZM0 1159 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 ARHGAP11AQ6P4F7 1023 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 TRILQ7L0X0 811 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 C16orf62Q7Z3J2 963 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 MARCH3Q86UD3 253 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 SPPL2CQ8IUH8 684 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 CHERPQ8IWX8 916 aaKnown RBP17.66■□□□□ 0.42
DDX54-207ENST00000550016 C10orf82Q8WW14 230 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 RAB8BQ92930 207 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 DTNBP1Q96EV8 351 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 HOXD1Q9GZZ0 328 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 LDAHQ9H6V9 325 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 PPP4R1LQ9P1A2 415 aa17.66■□□□□ 0.42
DDX54-207ENST00000550016 ZNF835Q9Y2P0 537 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms