RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 SHISA8B8ZZ34 492 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 INAFM1C9JVW0 142 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 COQ9O75208 318 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 ULK1O75385 1050 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 AQP8O94778 261 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 JUNP05412 331 aaKnown RBP13.85□□□□□ -0.19
RAB5C-205ENST00000550013 THBDP07204 575 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 HMOX2P30519 316 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 MPIP34949 423 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 PTH2RP49190 550 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 EEFSECP57772 596 aaKnown RBP13.85□□□□□ -0.19
RAB5C-205ENST00000550013 ETF1P62495 437 aaKnown RBP13.85□□□□□ -0.19
RAB5C-205ENST00000550013 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
RAB5C-205ENST00000550013 HEPACAMQ14CZ8 416 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 EXOC3L2Q2M3D2 409 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 SPIN4Q56A73 249 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 TMEM107Q6UX40 140 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 MARCH3Q86UD3 253 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 CDC26Q8NHZ8 85 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 DUSP19Q8WTR2 217 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 C1GALT1C1Q96EU7 318 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 STMN4Q9H169 189 aaPredicted RBP13.85□□□□□ -0.19
RAB5C-205ENST00000550013 PROCRQ9UNN8 238 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 ABCG2Q9UNQ0 655 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 TIMM22Q9Y584 194 aa13.85□□□□□ -0.19
RAB5C-205ENST00000550013 SONP18583 2426 aaKnown RBP13.85□□□□□ -0.19
RAB5C-205ENST00000550013 GMFGO60234 142 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 DLX3O60479 287 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 CNOT4O95628 575 aaKnown RBP13.84□□□□□ -0.19
RAB5C-205ENST00000550013 ANXA4P09525 319 aaPredicted RBP13.84□□□□□ -0.19
RAB5C-205ENST00000550013 TBXA2RP21731 343 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 SLC6A8P48029 635 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 RFX3P48380 749 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 NCBP2P52298 156 aaKnown RBP eCLIP13.84□□□□□ -0.19
RAB5C-205ENST00000550013 FGFBP1Q14512 234 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 CYP27C1Q4G0S4 372 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 LGSNQ5TDP6 509 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 GALNT18Q6P9A2 607 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 PLEKHM3Q6ZWE6 761 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 FAM214BQ7L5A3 538 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 METTL25Q8N6Q8 603 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 IGFBPL1Q8WX77 278 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 C11orf24Q96F05 449 aaPredicted RBP13.84□□□□□ -0.19
RAB5C-205ENST00000550013 KCNA7Q96RP8 456 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 GSX2Q9BZM3 304 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 PTGES2Q9H7Z7 377 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 SDHAF3Q9NRP4 125 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 FAM120CQ9NX05 1096 aaKnown RBP13.84□□□□□ -0.19
RAB5C-205ENST00000550013 TMEM216Q9P0N5 145 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 ZNF180Q9UJW8 692 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 CLEC4AQ9UMR7 237 aa13.84□□□□□ -0.19
RAB5C-205ENST00000550013 C19orf53Q9UNZ5 99 aaPredicted RBP13.84□□□□□ -0.19
RAB5C-205ENST00000550013 A0A087WV62 115 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.83□□□□□ -0.2
RAB5C-205ENST00000550013 LINC01387J3KSC0 135 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 KLF4O43474 513 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 IL33O95760 270 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 PLAUP00749 431 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 TAC1P20366 129 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 DDCP20711 480 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 RPS3AP61247 264 aaKnown RBP13.83□□□□□ -0.2
RAB5C-205ENST00000550013 PPP2R2BQ00005 443 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 C2orf80Q0P641 193 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 DECR1Q16698 335 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 PPP4R4Q6NUP7 873 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 GGNQ86UU5 652 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 CAVIN3Q969G5 261 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 AP4B1Q9Y6B7 739 aa13.83□□□□□ -0.2
RAB5C-205ENST00000550013 GXYLT2A0PJZ3 443 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 UPK1AO00322 258 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 UTS2O95399 124 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 PSMG1O95456 288 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 SNRPAP09012 282 aaKnown RBP13.82□□□□□ -0.2
RAB5C-205ENST00000550013 IMPDH1P20839 514 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 ZNF763Q0D2J5 394 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 SGCBQ16585 318 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 TMEM44Q2T9K0 475 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 SPDYAQ5MJ70 313 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 FAM71E1Q6IPT2 247 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 APOOLQ6UXV4 268 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 STAC2Q6ZMT1 411 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 LRRN4CLQ8ND94 238 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 IFT81Q8WYA0 676 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 SHCBP1LQ9BZQ2 653 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 GLIPR2Q9H4G4 154 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 Q9N2J8 555 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 DDX18Q9NVP1 670 aaKnown RBP13.82□□□□□ -0.2
RAB5C-205ENST00000550013 ADAM21Q9UKJ8 722 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 NFU1Q9UMS0 254 aa13.82□□□□□ -0.2
RAB5C-205ENST00000550013 EIF1AYO14602 144 aaKnown RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 ANGPTL1O95841 491 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 IGKV1D-16P01601 117 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 OPN1LWP04000 364 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 ENO1P06733 434 aaKnown RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 FCGR2AP12318 317 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 ATP5F1P24539 256 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 EIF1AXP47813 144 aaKnown RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 CLK3P49761 638 aaKnown RBP13.81□□□□□ -0.2
RAB5C-205ENST00000550013 FOXA1P55317 472 aa13.81□□□□□ -0.2
RAB5C-205ENST00000550013 PKNOX1P55347 436 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms