RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 GCNT2Q8N0V5 402 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 FBXO30Q8TB52 745 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 GPR151Q8TDV0 419 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 WNT2BQ93097 391 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 ZBED6CLQ96FA7 236 aaPredicted RBP14.79□□□□□ -0.04
VPS29-207ENST00000549970 RMND5BQ96G75 393 aaPredicted RBP14.79□□□□□ -0.04
VPS29-207ENST00000549970 ZNF764Q96H86 408 aaPredicted RBP14.79□□□□□ -0.04
VPS29-207ENST00000549970 TM9SF2Q99805 663 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 C3orf14Q9HBI5 128 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 EML4Q9HC35 981 aaKnown RBP14.79□□□□□ -0.04
VPS29-207ENST00000549970 SDHAF3Q9NRP4 125 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 FAM120CQ9NX05 1096 aaKnown RBP14.79□□□□□ -0.04
VPS29-207ENST00000549970 CLCF1Q9UBD9 225 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 GIMAP2Q9UG22 337 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 TMED5Q9Y3A6 229 aa14.79□□□□□ -0.04
VPS29-207ENST00000549970 PCNX3Q9H6A9 2034 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 TTC36A6NLP5 189 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 TBX19O60806 448 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 RCBTB2O95199 551 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 KCNH1O95259 989 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 UTS2O95399 124 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 IGKV1D-16P01601 117 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 FGF4P08620 206 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 IFI6P09912 130 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 CREB1P16220 341 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 DNAJA1P31689 397 aaKnown RBP14.78□□□□□ -0.04
VPS29-207ENST00000549970 CLK3P49761 638 aaKnown RBP14.78□□□□□ -0.04
VPS29-207ENST00000549970 B3GALT5-AS1P59052 145 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 PDE7AQ13946 482 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 UGT3A2Q3SY77 523 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 GALNT10Q86SR1 603 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 LUZP2Q86TE4 346 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 NUP43Q8NFH3 380 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 OR5M1Q8NGP8 315 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 AENQ8WTP8 325 aaKnown RBP14.78□□□□□ -0.04
VPS29-207ENST00000549970 DUSP19Q8WTR2 217 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 FAM222BQ8WU58 562 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 SLC9A6Q92581 669 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 ZFP3Q96NJ6 502 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 UCN2Q96RP3 112 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 SFXN3Q9BWM7 321 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 TBL1XR1Q9BZK7 514 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 CLEC4MQ9H2X3 399 aaPredicted RBP14.78□□□□□ -0.04
VPS29-207ENST00000549970 JKAMPQ9P055 326 aa14.78□□□□□ -0.04
VPS29-207ENST00000549970 TUBAL3A6NHL2 446 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 A6NNC1 897 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 GMFGO60234 142 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 TGM6O95932 706 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 BCKDHAP12694 445 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 PEPDP12955 493 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 ASMTP46597 345 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 CPA2P48052 419 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 GANABQ14697 944 aaKnown RBP14.77□□□□□ -0.05
VPS29-207ENST00000549970 GRAMD1BQ3KR37 738 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 VPS26BQ4G0F5 336 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 CHMP1BQ7LBR1 199 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 P4HA3Q7Z4N8 544 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 EXOC3L1Q86VI1 746 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 KIF18BQ86Y91 864 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 CEP70Q8NHQ1 597 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 LINC01560Q8TB33 94 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 MS4A4EQ96PG1 132 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 RBM24Q9BX46 236 aaKnown RBP14.77□□□□□ -0.05
VPS29-207ENST00000549970 ROPN1BQ9BZX4 212 aaPredicted RBP14.77□□□□□ -0.05
VPS29-207ENST00000549970 PTGES2Q9H7Z7 377 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 ROPN1Q9HAT0 212 aaPredicted RBP14.77□□□□□ -0.05
VPS29-207ENST00000549970 RASSF1Q9NS23 344 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 ACSS1Q9NUB1 689 aaPredicted RBP14.77□□□□□ -0.05
VPS29-207ENST00000549970 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.77□□□□□ -0.05
VPS29-207ENST00000549970 V9GYY5 206 aaPredicted RBP14.77□□□□□ -0.05
VPS29-207ENST00000549970 HIVEP1P15822 2718 aa14.77□□□□□ -0.05
VPS29-207ENST00000549970 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 H3BML4 177 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 SEC14L5O43304 696 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 PEX11AO75192 247 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 SKAP2O75563 359 aaPredicted RBP14.76□□□□□ -0.05
VPS29-207ENST00000549970 NKX2-2O95096 273 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 ANGPTL1O95841 491 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 ACP2P11117 423 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 ARRB2P32121 409 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 HPCAL1P37235 193 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 FRKP42685 505 aaPredicted RBP14.76□□□□□ -0.05
VPS29-207ENST00000549970 ART1P52961 327 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 BCL2A1Q16548 175 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 EMBQ6PCB8 327 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 APOOLQ6UXV4 268 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 SPNS3Q6ZMD2 512 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 R3HCC1LQ7Z5L2 792 aaKnown RBP14.76□□□□□ -0.05
VPS29-207ENST00000549970 HOMEZQ8IX15 550 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 MEIOBQ8N635 442 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 CDRT4Q8N9R6 151 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 C1GALT1C1Q96EU7 318 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 GIMAP5Q96F15 307 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 OTUB1Q96FW1 271 aaPredicted RBP14.76□□□□□ -0.05
VPS29-207ENST00000549970 PPP3R2Q96LZ3 170 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 C1orf50Q9BV19 199 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 ACBD3Q9H3P7 528 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 MED13LQ71F56 2210 aa14.76□□□□□ -0.05
VPS29-207ENST00000549970 OR2M5A3KFT3 312 aa14.75□□□□□ -0.05
VPS29-207ENST00000549970 FAM221AA4D161 298 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms