RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 TOXO94900 526 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 IFNA14P01570 189 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 SLC35G4P0C7Q5 338 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 OSMP13725 252 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 MYL12AP19105 171 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 TAS2R41P59536 307 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 GPR68Q15743 365 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 MLF2Q15773 248 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 BTBD16Q32M84 506 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF542PQ5EBM4 170 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 FAM209AQ5JX71 171 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 VN1R5Q7Z5H4 357 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 ANKRD53Q8N9V6 530 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 BEST4Q8NFU0 473 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 OR51G2Q8NGK0 314 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 SNX18Q96RF0 628 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 INSM2Q96T92 566 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 NKX3-1Q99801 234 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 MND1Q9BWT6 205 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 TAPBPLQ9BX59 468 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 RNF121Q9H920 327 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 GALNT9Q9HCQ5 603 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 MCUBQ9NWR8 336 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 A3GALT2U3KPV4 340 aa10.39□□□□□ -0.75
LINC00661-204ENST00000549354 SNRNP200O75643 2136 aaKnown RBP10.39□□□□□ -0.75
LINC00661-204ENST00000549354 ZSCAN5BA6NJL1 495 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ISM1B1AKI9 464 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 RGS13O14921 159 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 SMAD9O15198 467 aaKnown RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 B4GALT2O60909 372 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 CDC123O75794 336 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 PPP2CBP62714 309 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 PPP2CAP67775 309 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ODF4Q2M2E3 257 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 GXYLT1Q4G148 440 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 CNIH2Q6PI25 160 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TMEM92Q6UXU6 159 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ADGRF3Q8IZF5 1079 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 SMPDL3AQ92484 453 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 POP5Q969H6 163 aaKnown RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TWSG1Q9GZX9 223 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 SEC14L4Q9UDX3 406 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3DA0A087WVF3 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3IA0A087WXS9 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3EA0A087X179 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3KA0A087X1G2 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 A0A0B4J203 849 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 A0A0X1KG70 313 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3FA6NER0 549 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 HMX3A6NHT5 357 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 C12orf71A8MTZ7 269 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3LB9A6J9 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 PDPK1O15530 556 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 NDUFS4O43181 175 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 FCMRO60667 390 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 SCO1O75880 301 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 IGLV3-19P01714 112 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 YES1P07947 543 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3HP0C7X1 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 AHRP35869 848 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 SMAD4Q13485 552 aaKnown RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF630Q2M218 657 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 SMUG1Q53HV7 270 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 C6orf132Q5T0Z8 1188 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 KHDRBS2Q5VWX1 349 aaKnown RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3GQ6DHY5 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3CQ6IPX1 549 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF730Q6ZMV8 503 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 IZUMO1Q8IYV9 350 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TBC1D3Q8IZP1 549 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 OR52I1Q8NGK6 324 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 CREB3L4Q8TEY5 395 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ZFP3Q96NJ6 502 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 BHLHE41Q9C0J9 482 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 REV1Q9UBZ9 1251 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 PLEKHB1Q9UF11 243 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 MMP17Q9ULZ9 603 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 RPL36Q9Y3U8 105 aaKnown RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 PCDHGB2Q9Y5G2 931 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 CACNB4O00305 520 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 HMGN2P05204 90 aaKnown RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ARAFP10398 606 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 HCCSP53701 268 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 PDE7AQ13946 482 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 MLIPQ5VWP3 458 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 PGBD2Q6P3X8 592 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ESPNLQ6ZVH7 1005 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 OR7G1Q8NGA0 311 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 GCDHQ92947 438 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 KCTD7Q96MP8 289 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 KATNB1Q9BVA0 655 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 TRIM45Q9H8W5 580 aaPredicted RBP10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ADAP2Q9NPF8 381 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 SLC2A4RGQ9NR83 387 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 CLCA2Q9UQC9 943 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 ALG5Q9Y673 324 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 DMDP11532 3685 aa10.38□□□□□ -0.75
LINC00661-204ENST00000549354 MBTPS2O43462 519 aa10.37□□□□□ -0.75
LINC00661-204ENST00000549354 PRICKLE3O43900 615 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms