RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CCDC116Q8IYX3 515 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 PRR22Q8IZ63 422 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 MREGQ8N565 214 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 WNT2BQ93097 391 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 OMA1Q96E52 524 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 NODALQ96S42 347 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 TM9SF2Q99805 663 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 OSBPL11Q9BXB4 747 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 EBPLQ9BY08 206 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ITPAQ9BY32 194 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 REG4Q9BYZ8 158 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 BRINP2Q9C0B6 783 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 PIGMQ9H3S5 423 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 KLHL28Q9NXS3 571 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ZNF226Q9NYT6 803 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 PRODH2Q9UF12 536 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 PTGDR2Q9Y5Y4 395 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 ZNF780BQ9Y6R6 833 aa11.02□□□□□ -0.65
DDX54-206ENST00000549271 OR6C70A6NIJ9 312 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 ESPNB1AK53 854 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 UGT2B11O75310 529 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 EMDP50402 254 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 GFRA1P56159 465 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 PSPHP78330 225 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 IFFO1Q0D2I5 559 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 KIAA0040Q15053 153 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 CLEC12BQ2HXU8 276 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 ZNF628Q5EBL2 1059 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 SPDYAQ5MJ70 313 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 FAM71E1Q6IPT2 247 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 ENPP6Q6UWR7 440 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 Q6ZSR9 355 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 YRDCQ86U90 279 aaKnown RBP11.01□□□□□ -0.65
DDX54-206ENST00000549271 WDSUB1Q8N9V3 476 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 FAM76AQ8TAV0 307 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 ZNF675Q8TD23 568 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 TCP10LQ8TDR4 215 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 TMEM171Q8WVE6 324 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 ERP27Q96DN0 273 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 DTNBP1Q96EV8 351 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 FAM111AQ96PZ2 611 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 TUBA1CQ9BQE3 449 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 MECRQ9BV79 373 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 ACBD3Q9H3P7 528 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 TUBB1Q9H4B7 451 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 CXorf56Q9H5V9 222 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 ANKRA2Q9H9E1 313 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 SLC35C2Q9NQQ7 365 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 BCAP29Q9UHQ4 241 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 MID2Q9UJV3 735 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 RAB21Q9UL25 225 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 MRPS18CQ9Y3D5 142 aaKnown RBP11.01□□□□□ -0.65
DDX54-206ENST00000549271 WIF1Q9Y5W5 379 aa11.01□□□□□ -0.65
DDX54-206ENST00000549271 SVEP1Q4LDE5 3571 aa11□□□□□ -0.65
DDX54-206ENST00000549271 YLPM1P49750 1951 aaKnown RBP11□□□□□ -0.65
DDX54-206ENST00000549271 PRAMEF25A6NGN4 478 aa11□□□□□ -0.65
DDX54-206ENST00000549271 FRG2CA6NGY1 282 aa11□□□□□ -0.65
DDX54-206ENST00000549271 A8MV72 311 aaPredicted RBP11□□□□□ -0.65
DDX54-206ENST00000549271 MYO1GB0I1T2 1018 aa11□□□□□ -0.65
DDX54-206ENST00000549271 NPIPB8E9PQR5 432 aa11□□□□□ -0.65
DDX54-206ENST00000549271 AZIN1O14977 448 aa11□□□□□ -0.65
DDX54-206ENST00000549271 ABCB7O75027 752 aa11□□□□□ -0.65
DDX54-206ENST00000549271 CRCPO75575 148 aa11□□□□□ -0.65
DDX54-206ENST00000549271 BCAS2O75934 225 aaPredicted RBP11□□□□□ -0.65
DDX54-206ENST00000549271 RSL1D1O76021 490 aaKnown RBP11□□□□□ -0.65
DDX54-206ENST00000549271 CHRNGP07510 517 aa11□□□□□ -0.65
DDX54-206ENST00000549271 PRPH2P23942 346 aa11□□□□□ -0.65
DDX54-206ENST00000549271 CHMP24386 653 aa11□□□□□ -0.65
DDX54-206ENST00000549271 ARRB2P32121 409 aa11□□□□□ -0.65
DDX54-206ENST00000549271 GSTM5P46439 218 aa11□□□□□ -0.65
DDX54-206ENST00000549271 DIO3P55073 304 aa11□□□□□ -0.65
DDX54-206ENST00000549271 MRPS35P82673 323 aaKnown RBP11□□□□□ -0.65
DDX54-206ENST00000549271 FAM27E3Q08E93 113 aa11□□□□□ -0.65
DDX54-206ENST00000549271 C2orf80Q0P641 193 aa11□□□□□ -0.65
DDX54-206ENST00000549271 PLCXD2Q0VAA5 305 aa11□□□□□ -0.65
DDX54-206ENST00000549271 GAB1Q13480 694 aa11□□□□□ -0.65
DDX54-206ENST00000549271 VEZF1Q14119 521 aa11□□□□□ -0.65
DDX54-206ENST00000549271 HEPACAMQ14CZ8 416 aa11□□□□□ -0.65
DDX54-206ENST00000549271 IMPG1Q17R60 797 aa11□□□□□ -0.65
DDX54-206ENST00000549271 UGT3A2Q3SY77 523 aa11□□□□□ -0.65
DDX54-206ENST00000549271 DESI1Q6ICB0 168 aa11□□□□□ -0.65
DDX54-206ENST00000549271 NOXRED1Q6NXP6 359 aa11□□□□□ -0.65
DDX54-206ENST00000549271 OR52R1Q8NGF1 315 aa11□□□□□ -0.65
DDX54-206ENST00000549271 OR2T11Q8NH01 316 aa11□□□□□ -0.65
DDX54-206ENST00000549271 RNF138Q8WVD3 245 aa11□□□□□ -0.65
DDX54-206ENST00000549271 KAT2AQ92830 837 aa11□□□□□ -0.65
DDX54-206ENST00000549271 EXOSC8Q96B26 276 aaKnown RBP11□□□□□ -0.65
DDX54-206ENST00000549271 INTS12Q96CB8 462 aaKnown RBP11□□□□□ -0.65
DDX54-206ENST00000549271 SLC35A4Q96G79 324 aa11□□□□□ -0.65
DDX54-206ENST00000549271 TRMOQ9BU70 441 aa11□□□□□ -0.65
DDX54-206ENST00000549271 G6PC3Q9BUM1 346 aa11□□□□□ -0.65
DDX54-206ENST00000549271 AMBRA1Q9C0C7 1298 aa11□□□□□ -0.65
DDX54-206ENST00000549271 GALNT9Q9HCQ5 603 aa11□□□□□ -0.65
DDX54-206ENST00000549271 SERHLQ9NQF3 203 aa11□□□□□ -0.65
DDX54-206ENST00000549271 RRAGDQ9NQL2 400 aaPredicted RBP11□□□□□ -0.65
DDX54-206ENST00000549271 TAS2R7Q9NYW3 318 aa11□□□□□ -0.65
DDX54-206ENST00000549271 EHD3Q9NZN3 535 aa11□□□□□ -0.65
DDX54-206ENST00000549271 KLRF1Q9NZS2 232 aa11□□□□□ -0.65
DDX54-206ENST00000549271 CLCF1Q9UBD9 225 aa11□□□□□ -0.65
DDX54-206ENST00000549271 PACSIN3Q9UKS6 424 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms