RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PLPP4Q5VZY2 271 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 MZT2AQ6P582 158 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 METAP1DQ6UB28 335 aaPredicted RBP13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 BMPERQ8N8U9 685 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR9A2Q8NGT5 310 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 SAMD8Q96LT4 415 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 FERD3LQ96RJ6 166 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 BTBD1Q9H0C5 482 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 OSGEPL1Q9H4B0 414 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 SGK494L7N484 410 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 ACRP10323 421 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 ADH5P11766 374 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 DRD2P14416 443 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR10A3P58181 314 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 TGM3Q08188 693 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 ST3GAL3Q11203 375 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 MAB21L1Q13394 359 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 SLC9A5Q14940 896 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 ARHGAP19Q14CB8 494 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 PGGHGQ32M88 737 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 BCL2L15Q5TBC7 163 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 FAM205BPQ63HN1 556 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 METRNLQ641Q3 311 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 ZNF765Q7L2R6 523 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 LRRTM4Q86VH4 590 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 SYNPO2LQ9H987 977 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 MARK1Q9P0L2 795 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 TNFRSF10DQ9UBN6 386 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 TEKT2Q9UIF3 430 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 ADAM29Q9UKF5 820 aa13.22□□□□□ -0.29
RAPGEF3-218ENST00000548919 TRPM6Q9BX84 2022 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 TRAV6A0A075B6T7 132 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 MEN1O00255 615 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 AIFM1O95831 613 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 CERS1P27544 350 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 PPM1AP35813 382 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 MRPL28Q13084 256 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 PLBD1Q6P4A8 553 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 PLEKHM3Q6ZWE6 761 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 ACOT4Q8N9L9 421 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 SMAP2Q8WU79 429 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 AKAP1Q92667 903 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 OSTF1Q92882 214 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 ARHGDIGQ99819 225 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 FAIM2Q9BWQ8 316 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 ASB4Q9Y574 426 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR1A2Q9Y585 309 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 MDC1Q14676 2089 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 SCN2AQ99250 2005 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 A0A0A6YYJ9 748 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 SCAMP1O15126 338 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 CHST10O43529 356 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 RNF13O43567 381 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 TRIM3O75382 744 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 IGHA1P01876 353 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 SLC35G4P0C7Q5 338 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 SHC1P29353 583 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 HTR1FP30939 366 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR3A3P47888 321 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 SRP9P49458 86 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 PDX1P52945 283 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 RGS8P57771 180 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 MLF2Q15773 248 aaPredicted RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 SLC39A5Q6ZMH5 540 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 DGLUCYQ7Z3D6 616 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 GDF7Q7Z4P5 450 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 TIGD4Q8IY51 512 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 NUP43Q8NFH3 380 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 CXorf40AQ8TE69 158 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 OR8D1Q8WZ84 308 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 PHF21AQ96BD5 680 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 ARSGQ96EG1 525 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 CAMK1GQ96NX5 476 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 IMP3Q9NV31 184 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 IL20Q9NYY1 176 aa13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 EXOGQ9Y2C4 368 aaKnown RBP13.21□□□□□ -0.29
RAPGEF3-218ENST00000548919 REV3LO60673 3130 aa13.21□□□□□ -0.3
RAPGEF3-218ENST00000548919 OTOL1A6NHN0 477 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 FABP7O15540 132 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 EFCAB14O75071 495 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 GCGRP47871 477 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 RPA4Q13156 261 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 GNA13Q14344 377 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 FCN2Q15485 313 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 ZNF620Q6ZNG0 422 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 ERN2Q76MJ5 926 aaKnown RBP13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 ANKRD33Q7Z3H0 272 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 C16orf62Q7Z3J2 963 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 GRASPQ7Z6J2 395 aaPredicted RBP13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 TMEM99Q8N816 258 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 SAMD12Q8N8I0 201 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 OR2A1Q8NGT9 310 aa13.2□□□□□ -0.3
RAPGEF3-218ENST00000548919 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms