RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 ZNF675Q8TD23 568 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 TRPC4APQ8TEL6 797 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 C1GALT1C1Q96EU7 318 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 CNRIP1Q96F85 164 aaPredicted RBP12.02□□□□□ -0.49
CCDC59-202ENST00000547758 ZNF681Q96N22 645 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 CDK15Q96Q40 435 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 TNFRSF13CQ96RJ3 184 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 TRAF4Q9BUZ4 470 aaPredicted RBP12.02□□□□□ -0.49
CCDC59-202ENST00000547758 SHARPINQ9H0F6 387 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 NGBQ9NPG2 151 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 SDHAF3Q9NRP4 125 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 ACOT9Q9Y305 439 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 ZNF780BQ9Y6R6 833 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 DYSFO75923 2080 aa12.02□□□□□ -0.49
CCDC59-202ENST00000547758 FAM234BA2RU67 622 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 EIF1AYO14602 144 aaKnown RBP12.01□□□□□ -0.49
CCDC59-202ENST00000547758 TP73O15350 636 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 CLDN9O95484 217 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 CD8AP01732 235 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 FESP07332 822 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 SSTR1P30872 391 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 ARL1P40616 181 aaPredicted RBP12.01□□□□□ -0.49
CCDC59-202ENST00000547758 ALDH9A1P49189 494 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 ALDH18A1P54886 795 aaKnown RBP12.01□□□□□ -0.49
CCDC59-202ENST00000547758 NRF1Q16656 503 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 ERCC6LQ2NKX8 1250 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 GLYR1Q49A26 553 aaPredicted RBP12.01□□□□□ -0.49
CCDC59-202ENST00000547758 FRG2Q64ET8 278 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 COMMD6Q7Z4G1 85 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 SLC44A2Q8IWA5 706 aaPredicted RBP12.01□□□□□ -0.49
CCDC59-202ENST00000547758 METTL4Q8N3J2 472 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 OR4N2Q8NGD1 307 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 OR52B6Q8NGF0 335 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 RHEBL1Q8TAI7 183 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 UHMK1Q8TAS1 419 aaKnown RBP12.01□□□□□ -0.49
CCDC59-202ENST00000547758 ROBO4Q8WZ75 1007 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 TM4SF18Q96CE8 201 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 NXNL1Q96CM4 212 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 ERP27Q96DN0 273 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 FRG2BQ96QU4 278 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 TRIM2Q9C040 744 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 GRIP2Q9C0E4 1043 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 C12orf49Q9H741 205 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 FOLH1BQ9HBA9 442 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 GLRX2Q9NS18 164 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 MCTS1Q9ULC4 181 aaKnown RBP12.01□□□□□ -0.49
CCDC59-202ENST00000547758 ABCG2Q9UNQ0 655 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 OR10H1Q9Y4A9 318 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 SNX8Q9Y5X2 465 aa12.01□□□□□ -0.49
CCDC59-202ENST00000547758 FADS1O60427 444 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 DLX3O60479 287 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 SRD5A1P18405 259 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 CRABP2P29373 138 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 SPRP35270 261 aaPredicted RBP12□□□□□ -0.49
CCDC59-202ENST00000547758 NUDT6P53370 316 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 RUNX1T1Q06455 604 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 BSPH1Q075Z2 132 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 LOXL1Q08397 574 aaPredicted RBP12□□□□□ -0.49
CCDC59-202ENST00000547758 TAB1Q15750 504 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 TTC19Q6DKK2 380 aaPredicted RBP12□□□□□ -0.49
CCDC59-202ENST00000547758 FIGNL1Q6PIW4 674 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 CLEC2AQ6UVW9 174 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 ATG4DQ86TL0 474 aaPredicted RBP12□□□□□ -0.49
CCDC59-202ENST00000547758 DTX2Q86UW9 622 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 RETREG3Q86VR2 466 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 CCDC116Q8IYX3 515 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 ZNF619Q8N2I2 560 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 OR10H5Q8NGA6 315 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 OR10D3Q8NH80 312 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 PYROXD1Q8WU10 500 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 KAT2AQ92830 837 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 FAIM2Q9BWQ8 316 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 HDHD5Q9BXW7 423 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 RTN4RQ9BZR6 473 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 HEATR1Q9H583 2144 aaKnown RBP12□□□□□ -0.49
CCDC59-202ENST00000547758 NOL11Q9H8H0 719 aaKnown RBP12□□□□□ -0.49
CCDC59-202ENST00000547758 PFDN4Q9NQP4 134 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 PAQR5Q9NXK6 330 aaPredicted RBP12□□□□□ -0.49
CCDC59-202ENST00000547758 FLRT3Q9NZU0 649 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 STOML1Q9UBI4 398 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 UTS2RQ9UKP6 389 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 PPP2R2CQ9Y2T4 447 aa12□□□□□ -0.49
CCDC59-202ENST00000547758 TCRBV9S1A1TA0A576 114 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 FAM159BA6NKW6 160 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 SHISA8B8ZZ34 492 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 UBFD1O14562 309 aaKnown RBP11.99□□□□□ -0.49
CCDC59-202ENST00000547758 OR7A17O14581 309 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 GCM2O75603 506 aaPredicted RBP11.99□□□□□ -0.49
CCDC59-202ENST00000547758 SIX3O95343 332 aaPredicted RBP11.99□□□□□ -0.49
CCDC59-202ENST00000547758 SYNGR4O95473 234 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 TUBBP07437 444 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 ZNF16P17020 682 aaPredicted RBP11.99□□□□□ -0.49
CCDC59-202ENST00000547758 IL32P24001 234 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 ADH6P28332 368 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 AGTR1P30556 359 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 CCNG1P51959 295 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 DR1Q01658 176 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 GALNT1Q10472 559 aaPredicted RBP11.99□□□□□ -0.49
CCDC59-202ENST00000547758 IFT88Q13099 833 aa11.99□□□□□ -0.49
CCDC59-202ENST00000547758 TSC22D1Q15714 1073 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms