RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 PRR5P85299 388 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 ST3GAL3Q11203 375 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 SGCGQ13326 291 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 FCN2Q15485 313 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 CNKSR3Q6P9H4 555 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 CXXC5Q7LFL8 322 aaKnown RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 PRSS45Q7RTY3 260 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 C10orf53Q8N6V4 93 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 OR52L1Q8NGH7 329 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 OR2L2Q8NH16 312 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 INSM2Q96T92 566 aaPredicted RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 POLDIP3Q9BY77 421 aaKnown RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 PRKNO60260 465 aaPredicted RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 ARSBP15848 533 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 PDX1P52945 283 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 ARPC4P59998 168 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 ZNF234Q14588 700 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 TRAM2Q15035 370 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 GET4Q7L5D6 327 aaPredicted RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 SHISA5Q8N114 240 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 OR7D2Q96RA2 312 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 ZNF559Q9BR84 538 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 GPR174Q9BXC1 333 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 CCDC86Q9H6F5 360 aaKnown RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 FBXL4Q9UKA2 621 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 LSM2Q9Y333 95 aaKnown RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 GTPBP1O00178 669 aaKnown RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 LANCL1O43813 399 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 LDB3O75112 727 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 AIFM1O95831 613 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 LAMP2P13473 410 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 NT5EP21589 574 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 MAB21L1Q13394 359 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 AGERQ15109 404 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 C12orf73Q69YU5 71 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 ANKRD54Q6NXT1 300 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 RFPL4BQ6ZWI9 263 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 SETD6Q8TBK2 473 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 DPCDQ9BVM2 203 aaPredicted RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 HINT3Q9NQE9 182 aaKnown RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 SPHK1Q9NYA1 384 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 EIF3KQ9UBQ5 218 aaKnown RBP12.17□□□□□ -0.46
BRF1-210ENST00000547374 GTF2A1LQ9UNN4 478 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 CHST2Q9Y4C5 530 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 PLXNA3P51805 1871 aa12.17□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3DA0A087WVF3 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3IA0A087WXS9 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3EA0A087X179 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3KA0A087X1G2 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3FA6NER0 549 aaPredicted RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 ANKRD61A6NGH8 418 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 HNRNPCL2B2RXH8 293 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3LB9A6J9 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 I3L521 148 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 CDC123O75794 336 aaPredicted RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 RPN2P04844 631 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3HP0C7X1 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 ITGB8P26012 769 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 HOXD11P31277 338 aaPredicted RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 MPIP34949 423 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 CCR6P51684 374 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 PPP3R1P63098 170 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 SUZ12Q15022 739 aaKnown RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 POU4F3Q15319 338 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 PRPF38BQ5VTL8 546 aaKnown RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3GQ6DHY5 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3CQ6IPX1 549 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 PRR23CQ6ZRP0 262 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 ERN2Q76MJ5 926 aaKnown RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 TBC1D3Q8IZP1 549 aaPredicted RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 HDDC3Q8N4P3 179 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TMEM99Q8N816 258 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 LINC01555Q8NAE3 123 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 ZNF431Q8TF32 576 aaPredicted RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 RFKQ969G6 155 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 MKRN2Q9H000 416 aaKnown RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 BRD7Q9NPI1 651 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TAS2R7Q9NYW3 318 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 NCKAP1Q9Y2A7 1128 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 TP53BP1Q12888 1972 aaPredicted RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 SOD1P00441 154 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 PPM1AP35813 382 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 BCL6P41182 706 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 LIMS1P48059 325 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 ANXA11P50995 505 aaKnown RBP12.16□□□□□ -0.46
BRF1-210ENST00000547374 ZNF33BQ06732 778 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 ADAM15Q13444 863 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 OTPQ5XKR4 325 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 BHLHB9Q6PI77 547 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 GDPGP1Q6ZNW5 385 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 RNF44Q7L0R7 432 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 OR4Q3Q8NH05 313 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 PPP1R16AQ96I34 528 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 PRRC1Q96M27 445 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 GSDMCQ9BYG8 508 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 WDR26Q9H7D7 661 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 A4GALTQ9NPC4 353 aa12.16□□□□□ -0.46
BRF1-210ENST00000547374 NLGN3Q9NZ94 848 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms