RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 MAPK1P28482 360 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 CLK3P49761 638 aaKnown RBP23.96■■□□□ 1.43
SRSF9-202ENST00000546942 LHX2P50458 406 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 ASCL1P50553 236 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 PSMD4P55036 377 aaKnown RBP23.96■■□□□ 1.43
SRSF9-202ENST00000546942 DSCR4P56555 118 aaPredicted RBP23.96■■□□□ 1.43
SRSF9-202ENST00000546942 POMZP3Q6PJE2 187 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 R3HCC1LQ7Z5L2 792 aaKnown RBP23.96■■□□□ 1.43
SRSF9-202ENST00000546942 NUDCD3Q8IVD9 361 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 ZZZ3Q8IYH5 903 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 CEP70Q8NHQ1 597 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 MBD3L2Q8NHZ7 208 aaPredicted RBP23.96■■□□□ 1.43
SRSF9-202ENST00000546942 DUSP19Q8WTR2 217 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 ZNF764Q96H86 408 aaPredicted RBP23.96■■□□□ 1.43
SRSF9-202ENST00000546942 RTN4RQ9BZR6 473 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 CENPHQ9H3R5 247 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 SLC24A3Q9HC58 644 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 ABCG2Q9UNQ0 655 aa23.96■■□□□ 1.43
SRSF9-202ENST00000546942 CLCA1A8K7I4 914 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 SYT5O00445 386 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 CTIFO43310 598 aaKnown RBP23.95■■□□□ 1.42
SRSF9-202ENST00000546942 ZWINTO95229 277 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 UTS2O95399 124 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 IGKV1D-16P01601 117 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 HK1P19367 917 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 CTSSP25774 331 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 SERPINB5P36952 375 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 HPCAL1P37235 193 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 ATP6AP1LQ52LC2 224 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 CDH24Q86UP0 819 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 OR2M3Q8NG83 312 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 OR7A2PQ8NGA2 310 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 LRRC46Q96FV0 321 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 YIPF4Q9BSR8 244 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 TBL1XR1Q9BZK7 514 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 ACSS1Q9NUB1 689 aaPredicted RBP23.95■■□□□ 1.42
SRSF9-202ENST00000546942 FAM120CQ9NX05 1096 aaKnown RBP23.95■■□□□ 1.42
SRSF9-202ENST00000546942 MRPS18CQ9Y3D5 142 aaKnown RBP23.95■■□□□ 1.42
SRSF9-202ENST00000546942 CCDC168Q8NDH2 2452 aa23.95■■□□□ 1.42
SRSF9-202ENST00000546942 LYPLA1O75608 230 aaPredicted RBP23.94■■□□□ 1.42
SRSF9-202ENST00000546942 IFI6P09912 130 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 FRKP42685 505 aaPredicted RBP23.94■■□□□ 1.42
SRSF9-202ENST00000546942 KIR2DL3P43628 341 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 PTGR1Q14914 329 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 GRAMD1BQ3KR37 738 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 VPS26BQ4G0F5 336 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 XKR7Q5GH72 579 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 RAET1LQ5VY80 246 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 LRIG3Q6UXM1 1119 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 UBQLNLQ8IYU4 475 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 FADS6Q8N9I5 356 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 FNDC5Q8NAU1 212 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 OR5M1Q8NGP8 315 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 NUDT8Q8WV74 236 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 MTERF3Q96E29 417 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 OTUB1Q96FW1 271 aaPredicted RBP23.94■■□□□ 1.42
SRSF9-202ENST00000546942 C16orf58Q96GQ5 468 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 SH3GL2Q99962 352 aa23.94■■□□□ 1.42
SRSF9-202ENST00000546942 TTC36A6NLP5 189 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 EEF1E1-BLOC1S5C9J1V9 151 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 SCAMP2O15127 329 aaKnown RBP23.93■■□□□ 1.42
SRSF9-202ENST00000546942 EEF1E1O43324 174 aaKnown RBP23.93■■□□□ 1.42
SRSF9-202ENST00000546942 EMC8O43402 210 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 HSPA4LO95757 839 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 TMIGD3P0DMS9 266 aaPredicted RBP23.93■■□□□ 1.42
SRSF9-202ENST00000546942 CHMP24386 653 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 ETV4P43268 484 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 SERPINB4P48594 390 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 CLDN18P56856 261 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 FOXF2Q12947 444 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 C6orf136Q5SQH8 315 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 CDRT4Q8N9R6 151 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 RNASE6Q93091 150 aaKnown RBP23.93■■□□□ 1.42
SRSF9-202ENST00000546942 TUBGCP3Q96CW5 907 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 G6PC3Q9BUM1 346 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 PTGES2Q9H7Z7 377 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 SSU72Q9NP77 194 aaKnown RBP23.93■■□□□ 1.42
SRSF9-202ENST00000546942 ATP6V1HQ9UI12 483 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 SNX8Q9Y5X2 465 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 MED12LQ86YW9 2145 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 CELSR1Q9NYQ6 3014 aa23.93■■□□□ 1.42
SRSF9-202ENST00000546942 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 ITM2AO43736 263 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 NKX2-2O95096 273 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 ACP2P11117 423 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 LAMP1P11279 417 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 OPRM1P35372 400 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 B3GALT5-AS1P59052 145 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 IL23RQ5VWK5 629 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 FIGNL1Q6PIW4 674 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 SLC16A11Q8NCK7 471 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 JADE3Q92613 823 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 INTS12Q96CB8 462 aaKnown RBP23.92■■□□□ 1.42
SRSF9-202ENST00000546942 GIMAP5Q96F15 307 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 CHMP6Q96FZ7 201 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 PPP1R36Q96LQ0 422 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 MS4A4EQ96PG1 132 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 TM9SF2Q99805 663 aa23.92■■□□□ 1.42
SRSF9-202ENST00000546942 ZNF395Q9H8N7 513 aaPredicted RBP23.92■■□□□ 1.42
SRSF9-202ENST00000546942 CRIM1Q9NZV1 1036 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms