RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 ARMC7Q9H6L4 198 aa18■□□□□ 0.47
SKP2-208ENST00000546211 PDP1Q9P0J1 537 aaPredicted RBP18■□□□□ 0.47
SKP2-208ENST00000546211 NPIPA5A0A0B4J1W7 369 aa18■□□□□ 0.47
SKP2-208ENST00000546211 IGHV3-20A0A0C4DH32 117 aa18■□□□□ 0.47
SKP2-208ENST00000546211 C2orf92A0A1B0GVN3 265 aa18■□□□□ 0.47
SKP2-208ENST00000546211 FRG2CA6NGY1 282 aa18■□□□□ 0.47
SKP2-208ENST00000546211 SAGE2PA6NJ88 616 aa18■□□□□ 0.47
SKP2-208ENST00000546211 NPIPA7E9PJI5 369 aa18■□□□□ 0.47
SKP2-208ENST00000546211 NPIPA8P0DM63 369 aa18■□□□□ 0.47
SKP2-208ENST00000546211 DRD5P21918 477 aa18■□□□□ 0.47
SKP2-208ENST00000546211 PRKACGP22612 351 aa18■□□□□ 0.47
SKP2-208ENST00000546211 PPP2R2BQ00005 443 aa18■□□□□ 0.47
SKP2-208ENST00000546211 DECR1Q16698 335 aa18■□□□□ 0.47
SKP2-208ENST00000546211 C6orf52Q5T4I8 152 aa18■□□□□ 0.47
SKP2-208ENST00000546211 TMEM205Q6UW68 189 aa18■□□□□ 0.47
SKP2-208ENST00000546211 ZNF517Q6ZMY9 492 aaPredicted RBP18■□□□□ 0.47
SKP2-208ENST00000546211 ZNF836Q6ZNA1 936 aa18■□□□□ 0.47
SKP2-208ENST00000546211 CPEB2Q7Z5Q1 589 aaKnown RBP18■□□□□ 0.47
SKP2-208ENST00000546211 RBM45Q8IUH3 476 aaKnown RBP18■□□□□ 0.47
SKP2-208ENST00000546211 BCORP1Q8N888 145 aa18■□□□□ 0.47
SKP2-208ENST00000546211 LPAR4Q99677 370 aa18■□□□□ 0.47
SKP2-208ENST00000546211 SMURF2Q9HAU4 748 aa18■□□□□ 0.47
SKP2-208ENST00000546211 KCND3Q9UK17 655 aa18■□□□□ 0.47
SKP2-208ENST00000546211 MRTO4Q9UKD2 239 aaKnown RBP18■□□□□ 0.47
SKP2-208ENST00000546211 TEX51A0A1B0GUA7 166 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 PEX12O00623 359 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 DENRO43583 198 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 HS6ST1O60243 411 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 UGT2B17O75795 530 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 IGKV1D-16P01601 117 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 CD63P08962 238 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 CCNYL3P0C7X3 344 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 NID1P14543 1247 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 PSMD4P55036 377 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 SMIM11AP58511 58 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 EEF1A1P68104 462 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 LAPTM4AQ15012 233 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 NCF4Q15080 339 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 EBPQ15125 230 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 MAPK14Q16539 360 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.99■□□□□ 0.47
SKP2-208ENST00000546211 TMEM164Q5U3C3 297 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 PAPD4Q6PIY7 484 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 C6orf15Q6UXA7 325 aaPredicted RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 ZAR1Q86SH2 424 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 SLCO6A1Q86UG4 719 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 C9orf40Q8IXQ3 194 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 TAGAPQ8N103 731 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 CLIP4Q8N3C7 705 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 B3GNT7Q8NFL0 401 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 OR6T1Q8NGN1 323 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 OR52J3Q8NH60 311 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 WDR36Q8NI36 951 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 PHF10Q8WUB8 498 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 ADIPOR1Q96A54 375 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 RDH12Q96NR8 316 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 WFDC6Q9BQY6 131 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 NXF5Q9H1B4 397 aaKnown RBP17.99■□□□□ 0.47
SKP2-208ENST00000546211 PCDHGA10Q9Y5H3 936 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 ORC6Q9Y5N6 252 aa17.99■□□□□ 0.47
SKP2-208ENST00000546211 CENPVL1A0A0U1RR11 272 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 DLGAP1O14490 977 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 RPSAP08865 295 aaKnown RBP17.98■□□□□ 0.47
SKP2-208ENST00000546211 THRBP10828 461 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 RGS8P57771 180 aaPredicted RBP17.98■□□□□ 0.47
SKP2-208ENST00000546211 MERTKQ12866 999 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 NHSL2Q5HYW2 709 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 COLEC12Q5KU26 742 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 RNF220Q5VTB9 566 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 OR4C15Q8NGM1 316 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 GIPC3Q8TF64 312 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 NR4A3Q92570 626 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 BARD1Q99728 777 aaKnown RBP17.98■□□□□ 0.47
SKP2-208ENST00000546211 WWTR1Q9GZV5 400 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 ACER3Q9NUN7 267 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 KIF17Q9P2E2 1029 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 RHCGQ9UBD6 479 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 KCNE5Q9UJ90 142 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 ACAD8Q9UKU7 415 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 PADI1Q9ULC6 663 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 PTRH2Q9Y3E5 179 aaKnown RBP17.98■□□□□ 0.47
SKP2-208ENST00000546211 CHST2Q9Y4C5 530 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 PCDHGA3Q9Y5H0 932 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 SEC16AO15027 2179 aa17.98■□□□□ 0.47
SKP2-208ENST00000546211 PMS2P1A4D2B8 440 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 AP3D1O14617 1153 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 IFNA8P32881 189 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 GPR143P51810 404 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 HMGA2P52926 109 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 EPS8Q12929 822 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 EXOC3L2Q2M3D2 409 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 DHRSXQ8N5I4 330 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 ZNF614Q8N883 585 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 NFAM1Q8NET5 270 aaPredicted RBP17.97■□□□□ 0.47
SKP2-208ENST00000546211 PRRC1Q96M27 445 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 ADI1Q9BV57 179 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 EVA1AQ9H8M9 152 aa17.97■□□□□ 0.47
SKP2-208ENST00000546211 NMNAT1Q9HAN9 279 aaPredicted RBP17.97■□□□□ 0.47
SKP2-208ENST00000546211 RLIMQ9NVW2 624 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms