RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 THBS2P35442 1172 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 SSR2P43308 183 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 CAPZA2P47755 286 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 RAG2P55895 527 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 TLE2Q04725 743 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 MAP4K2Q12851 820 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 LASP1Q14847 261 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 ARHGEF6Q15052 776 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 FCN2Q15485 313 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 COL28A1Q2UY09 1125 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 POM121L1PQ3SYA9 428 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 SMUG1Q53HV7 270 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 WDR45BQ5MNZ6 344 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 LY6G5CQ5SRR4 150 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 IDNKQ5T6J7 187 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 FAM205BPQ63HN1 556 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 KIAA1161Q6NSJ0 714 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 SLC30A6Q6NXT4 461 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 TEX261Q6UWH6 196 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 MBOAT2Q6ZWT7 520 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 AMZ2Q86W34 360 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 KLBQ86Z14 1044 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 ACBD7Q8N6N7 88 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 WFIKKN2Q8TEU8 576 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 MENTQ9BUN1 341 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 DPAGT1Q9H3H5 408 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 ZFP64Q9NPA5 681 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 TRIM36Q9NQ86 728 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 CTPS2Q9NRF8 586 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 ENAMQ9NRM1 1142 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 IMP3Q9NV31 184 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 NLGN3Q9NZ94 848 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 PTGFRNQ9P2B2 879 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 U3KQ87 197 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 LOC105371267A0A1B0GV96 52 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 A0A1B0GVI7 797 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 A0A1W2PPV9 198 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 GSAPA4D1B5 854 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 CPSF4LA6NMK7 179 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 ALPPL2P10696 532 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 C6P13671 934 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 NDUFV2P19404 249 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 UQCRC1P31930 480 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 PPM1AP35813 382 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 ATP6V1E1P36543 226 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 ZNF77Q15935 545 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 GPR162Q16538 588 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 FAM214AQ32MH5 1076 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 TOR2AQ5JU69 321 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 BCL2L15Q5TBC7 163 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 CNKSR3Q6P9H4 555 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 LILRA6Q6PI73 481 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 CXXC5Q7LFL8 322 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 ADCK2Q7Z695 626 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 C2orf73Q8N5S3 287 aaPredicted RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 SIRT6Q8N6T7 355 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 OR8H1Q8NGG4 311 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 ZNF431Q8TF32 576 aaPredicted RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 PHF21AQ96BD5 680 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 AHCYL2Q96HN2 611 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 NECTIN4Q96NY8 510 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 C7orf50Q9BRJ6 194 aaKnown RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 ZBP1Q9H171 429 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 SLC38A1Q9H2H9 487 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 ZNF275Q9NSD4 429 aaPredicted RBP8.19□□□□□ -1.1
TDP1-204ENST00000545686 TDP1Q9NUW8 608 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 BABAM2Q9NXR7 383 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 KCNN3Q9UGI6 736 aa8.19□□□□□ -1.1
TDP1-204ENST00000545686 FEZF1A0PJY2 475 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 H7BY64 318 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 EMC8O43402 210 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 OR1F1O43749 312 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 PAHP00439 452 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 RAF1P04049 648 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 INHAP05111 366 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 EIF4EP06730 217 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 PAICSP22234 425 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 HOXD11P31277 338 aaPredicted RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 CCR2P41597 374 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 EPHA5P54756 1037 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 TAS2R43P59537 309 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 CSNK1G2P78368 415 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 RGS1Q08116 209 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 LRRC32Q14392 662 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 INSL4Q14641 139 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 SLC9A5Q14940 896 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 NTRK2Q16620 822 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 NIPAL3Q6P499 406 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 PLEKHM3Q6ZWE6 761 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 OLIG3Q7RTU3 272 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 DEFB128Q7Z7B8 93 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 LUZP2Q86TE4 346 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 NR2C2APQ86WQ0 139 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 MEX3DQ86XN8 651 aaKnown RBP8.18□□□□□ -1.1
TDP1-204ENST00000545686 GPALPP1Q8IXQ4 340 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 RAB42Q8N4Z0 105 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 DNAJC5GQ8N7S2 189 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 SPERTQ8NA61 448 aa8.18□□□□□ -1.1
TDP1-204ENST00000545686 TMIEQ8NEW7 156 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms