RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.31
RTN3-214ENST00000545432 WIPF1O43516 503 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 NME6O75414 186 aaPredicted RBP13.12□□□□□ -0.31
RTN3-214ENST00000545432 SIX3O95343 332 aaPredicted RBP13.12□□□□□ -0.31
RTN3-214ENST00000545432 CD3EP07766 207 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 GSTA2P09210 222 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 PSMA4P25789 261 aaKnown RBP13.12□□□□□ -0.31
RTN3-214ENST00000545432 IL12BP29460 328 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 CTBP2P56545 445 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 DSCR9P59020 149 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 TRAF3Q13114 568 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 TAB1Q15750 504 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 SGCBQ16585 318 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 NRF1Q16656 503 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 CYP27C1Q4G0S4 372 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 DUSP19Q8WTR2 217 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 KCTD4Q8WVF5 259 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 EFHD2Q96C19 240 aaPredicted RBP13.12□□□□□ -0.31
RTN3-214ENST00000545432 KLHL29Q96CT2 875 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 CDK15Q96Q40 435 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 KCNK17Q96T54 332 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
RTN3-214ENST00000545432 BEX2Q9BXY8 128 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 NGBQ9NPG2 151 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 FAM120CQ9NX05 1096 aaKnown RBP13.12□□□□□ -0.31
RTN3-214ENST00000545432 CLEC4AQ9UMR7 237 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 B3GALT5Q9Y2C3 310 aa13.12□□□□□ -0.31
RTN3-214ENST00000545432 GOLGA8QA0A0J9YX86 632 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 GOLGA8OA6NCC3 632 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 GOLGA8NF8WBI6 632 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 GOLGA8RI6L899 631 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 FESP07332 822 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 GFAPP14136 432 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 ZNF17P17021 662 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 DR1Q01658 176 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 FAM83EQ2M2I3 478 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 SFRP5Q5T4F7 317 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 FAM180BQ6P0A1 224 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 FIGNL1Q6PIW4 674 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 C3orf62Q6ZUJ4 267 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 RAPH1Q70E73 1250 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 STK32CQ86UX6 486 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 SLC44A2Q8IWA5 706 aaPredicted RBP13.11□□□□□ -0.31
RTN3-214ENST00000545432 SAMD14Q8IZD0 417 aaPredicted RBP13.11□□□□□ -0.31
RTN3-214ENST00000545432 OR10D3Q8NH80 312 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 FAIM2Q9BWQ8 316 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 BRF2Q9HAW0 419 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 TAS2R9Q9NYW1 312 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 STOML1Q9UBI4 398 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 UTS2RQ9UKP6 389 aa13.11□□□□□ -0.31
RTN3-214ENST00000545432 PLCE1Q9P212 2302 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 HMX2A2RU54 273 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 C7orf72A4D263 438 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 SHISA9B4DS77 424 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 CLOCKO15516 846 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 SCO2O43819 266 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 PSMG1O95456 288 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 C2P06681 752 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 AGTR1P30556 359 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 EIF1AXP47813 144 aaKnown RBP13.1□□□□□ -0.31
RTN3-214ENST00000545432 RAC1P63000 192 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 C11orf71Q6IPW1 123 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 GALNT10Q86SR1 603 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 ATG4DQ86TL0 474 aaPredicted RBP13.1□□□□□ -0.31
RTN3-214ENST00000545432 SLC35F6Q8N357 371 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 GTPBP8Q8N3Z3 284 aaPredicted RBP13.1□□□□□ -0.31
RTN3-214ENST00000545432 OR7G2Q8NG99 324 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 KAT2AQ92830 837 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 HS6ST2Q96MM7 605 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 PRRG4Q9BZD6 226 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 GP6Q9HCN6 339 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 FBXO34Q9NWN3 711 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 FLRT3Q9NZU0 649 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 MCTS1Q9ULC4 181 aaKnown RBP13.1□□□□□ -0.31
RTN3-214ENST00000545432 FREM1Q5H8C1 2179 aa13.1□□□□□ -0.31
RTN3-214ENST00000545432 A0A087WV62 115 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 HAX1O00165 279 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 EIF1AYO14602 144 aaKnown RBP13.09□□□□□ -0.31
RTN3-214ENST00000545432 SSX4O60224 188 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 KLHL2O95198 593 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 IL33O95760 270 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
RTN3-214ENST00000545432 TUBBP07437 444 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 CCNG1P51959 295 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 PRR5P85299 388 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 IRF9Q00978 393 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 BSPH1Q075Z2 132 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 C17orf67Q0P5P2 114 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 IFT88Q13099 833 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 APOOLQ6UXV4 268 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 TFAP2EQ6VUC0 442 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 MARCH3Q86UD3 253 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 WDR75Q8IWA0 830 aaKnown RBP13.09□□□□□ -0.31
RTN3-214ENST00000545432 KBTBD8Q8NFY9 601 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 OR9A2Q8NGT5 310 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 CISD1Q9NZ45 108 aaKnown RBP13.09□□□□□ -0.31
RTN3-214ENST00000545432 PCTPQ9UKL6 214 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms