RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	PKLR	P30613	574 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	GGT5	P36269	586 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	SERPINB5	P36952	375 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	CASP2	P42575	452 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	ALDH18A1	P54886	795 aa	Known RBP	6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	MAGOH	P61326	146 aa	Known RBP	6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	ABAT	P80404	500 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	LOXL1	Q08397	574 aa	Predicted RBP	6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	IFT88	Q13099	833 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	ZIC1	Q15915	447 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	HSPB2	Q16082	182 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	MAPKAPK3	Q16644	382 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	MLANA	Q16655	118 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	SLC5A12	Q1EHB4	618 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	FAM214A	Q32MH5	1076 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	HHAT	Q5VTY9	493 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	FAM166A	Q6J272	317 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	SLC25A25	Q6KCM7	469 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	CAPN13	Q6MZZ7	669 aa	Predicted RBP	6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	ZNF585A	Q6P3V2	769 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	SHISA6	Q6ZSJ9	500 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	LRRC70	Q7Z2Q7	622 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	MOGAT3	Q86VF5	341 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	C1QL4	Q86Z23	238 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	KLHDC8A	Q8IYD2	350 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	C4orf33	Q8N1A6	199 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	OR5M9	Q8NGP3	310 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	UBTD2	Q8WUN7	234 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	MRPL24	Q96A35	216 aa	Known RBP	6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	C8orf44	Q96CB5	159 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	DTNBP1	Q96EV8	351 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	ATOH8	Q96SQ7	321 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	EGFL8	Q99944	293 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	HAUS8	Q9BT25	410 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	TRMO	Q9BU70	441 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	ALG9	Q9H6U8	611 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	FAM60A	Q9NP50	221 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	BATF3	Q9NR55	127 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	TXLNG	Q9NUQ3	528 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	CD274	Q9NZQ7	290 aa		6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	NKX1-2	Q9UD57	310 aa	Predicted RBP	6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	TDRKH	Q9Y2W6	561 aa	Known RBP	6.12	□□□□□ -1.43
LDHA-223	ENST00000545215	LOC102723971	A0A1B0GUV8	181 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215		A0A1W2PQ72	361 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	CDHR4	A6H8M9	788 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	SUPT3H	B4E1H0	165 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	TARM1	B6A8C7	271 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	NPIPA2	E9PIF3	369 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	NPIPA3	F8WFD2	350 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	HCRTR1	O43613	425 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	KIAA0513	O60268	411 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	SUPT3H	O75486	399 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	STK16	O75716	305 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	PDE9A	O76083	593 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	SYF2	O95926	243 aa	Known RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	ITGAX	P20702	1163 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	RPA3	P35244	121 aa	Predicted RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	PNLIPRP1	P54315	467 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	VSX2	P58304	361 aa	Predicted RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	DNAJB13	P59910	316 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	AP2B1	P63010	937 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	RELA	Q04206	551 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	DLG1	Q12959	904 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	RIN1	Q13671	783 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	GRB7	Q14451	532 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	OR4D1	Q15615	310 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	PHKG1	Q16816	387 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	TIGD6	Q17RP2	521 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	MFSD4B	Q5TF39	518 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	AGTRAP	Q6RW13	159 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	ZYG11A	Q6WRX3	759 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	DOK3	Q7L591	496 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	KRT73	Q86Y46	540 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	IQCF2	Q8IXL9	164 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	BEST3	Q8N1M1	668 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	TBC1D19	Q8N5T2	526 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	CCDC63	Q8NA47	563 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	POGLUT1	Q8NBL1	392 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	RAB3IL1	Q8TBN0	382 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	TCP10L	Q8TDR4	215 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	RHBDF1	Q96CC6	855 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	ART5	Q96L15	291 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	OR2A14	Q96R47	310 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	PKP4	Q99569	1192 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	UTP23	Q9BRU9	249 aa	Known RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	C1QTNF3	Q9BXJ4	246 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	CHRNA10	Q9GZZ6	450 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	EHD1	Q9H4M9	534 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	CHODL	Q9H9P2	273 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	KCNK9	Q9NPC2	374 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	CCDC177	Q9NQR7	707 aa	Predicted RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	MRPS18A	Q9NVS2	196 aa	Known RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	SPHK1	Q9NYA1	384 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	WWOX	Q9NZC7	414 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	TMEM216	Q9P0N5	145 aa		6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	C6orf203	Q9P0P8	240 aa	Predicted RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	STOX2	Q9P2F5	926 aa	Predicted RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	PTBP2	Q9UKA9	531 aa	Known RBP	6.11	□□□□□ -1.43
LDHA-223	ENST00000545215	NXT1	Q9UKK6	140 aa	Known RBP	6.11	□□□□□ -1.43

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