RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 KERAO60938 352 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 STMN1P16949 149 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 EGR1P18146 543 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 IL32P24001 234 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 KRT20P35900 424 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 CDH11P55287 796 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 MORF4L2Q15014 288 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 SFRP5Q5T4F7 317 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 FAM219BQ5XKK7 198 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 TFAP2EQ6VUC0 442 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 C12orf54Q6X4T0 127 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 NUFIP2Q7Z417 695 aaKnown RBP8.34□□□□□ -1.07
CHD4-212ENST00000545083 STK32CQ86UX6 486 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
CHD4-212ENST00000545083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.34□□□□□ -1.07
CHD4-212ENST00000545083 L3MBTL4Q8NA19 623 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 SPC24Q8NBT2 197 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 TRIM58Q8NG06 486 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 ZNF675Q8TD23 568 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 C10orf105Q8TEF2 133 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 DUSP19Q8WTR2 217 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 HSD17B8Q92506 261 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 FAM168AQ92567 244 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 KAT2AQ92830 837 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 TM4SF18Q96CE8 201 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 KLHL29Q96CT2 875 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 MSI2Q96DH6 328 aaKnown RBP8.34□□□□□ -1.07
CHD4-212ENST00000545083 TSPAN17Q96FV3 270 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 CDK15Q96Q40 435 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 SERPINI1Q99574 410 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 GPR22Q99680 433 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 DDX47Q9H0S4 455 aaKnown RBP8.34□□□□□ -1.07
CHD4-212ENST00000545083 NGBQ9NPG2 151 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 XPR1Q9UBH6 696 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 KCNS2Q9ULS6 477 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 ANGPTL3Q9Y5C1 460 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 LOC100289279A0A1B0GTE1 492 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 E7EQL1 145 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 PGRMC1O00264 195 aaKnown RBP8.33□□□□□ -1.08
CHD4-212ENST00000545083 TP73O15350 636 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 DLX3O60479 287 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 UGDHO60701 494 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 LY6HO94772 140 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 TUBBP07437 444 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 ITGA2P17301 1181 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 USF1P22415 310 aaPredicted RBP8.33□□□□□ -1.08
CHD4-212ENST00000545083 MAPK12P53778 367 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 RAB10P61026 200 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 LSM11P83369 360 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHD4-212ENST00000545083 PDIA2Q13087 525 aaKnown RBP8.33□□□□□ -1.08
CHD4-212ENST00000545083 GTF2H2Q13888 395 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 FAM174BQ3ZCQ3 159 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 GLYR1Q49A26 553 aaPredicted RBP8.33□□□□□ -1.08
CHD4-212ENST00000545083 AGAP6Q5VW22 663 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 FAM166AQ6J272 317 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 GTF2H2CQ6P1K8 395 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 BHLHB9Q6PI77 547 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 ZNF662Q6ZS27 426 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 COMMD6Q7Z4G1 85 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 GOLGA7Q7Z5G4 137 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 CMC1Q7Z7K0 106 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 MARCH3Q86UD3 253 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 METTL4Q8N3J2 472 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 OR9A2Q8NGT5 310 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 OR2V1Q8NHB1 315 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 KISS1RQ969F8 398 aaPredicted RBP8.33□□□□□ -1.08
CHD4-212ENST00000545083 ADAD1Q96M93 576 aaKnown RBP8.33□□□□□ -1.08
CHD4-212ENST00000545083 RBBP8Q99708 897 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 PRR14Q9BWN1 585 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 HDHD5Q9BXW7 423 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 POTEKPQ9BYX7 375 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 PTGES2Q9H7Z7 377 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 IPPKQ9H8X2 491 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 GLRX2Q9NS18 164 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 FAIMQ9NVQ4 179 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 NSMCE4AQ9NXX6 385 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 NPAP1Q9NZP6 1156 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 ADAM29Q9UKF5 820 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 MCTS1Q9ULC4 181 aaKnown RBP8.33□□□□□ -1.08
CHD4-212ENST00000545083 VDAC3Q9Y277 283 aa8.33□□□□□ -1.08
CHD4-212ENST00000545083 A0A0J9YW62 118 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 ZNF814B7Z6K7 855 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 ABCD4O14678 606 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 TNFSF11O14788 317 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 ADAMDEC1O15204 470 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 TCF21O43680 179 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 SYNGR4O95473 234 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 ADAP00813 363 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 FESP07332 822 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 COL6A2P12110 1019 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 TTKP33981 857 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 GZMKP49863 264 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 ARL4CP56559 192 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 PSG6Q00889 435 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 SPOCK1Q08629 439 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 GALNT1Q10472 559 aaPredicted RBP8.32□□□□□ -1.08
CHD4-212ENST00000545083 SQLEQ14534 574 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 P2RY6Q15077 328 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 RAB35Q15286 201 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms