RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TRIM64CA6NLI5 447 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CLDN3O15551 220 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 STK17BO94768 372 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 GP9P14770 177 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 HOXB6P17509 224 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ADRA1AP35348 466 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CRYBA2P53672 197 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CALCOCO2Q13137 446 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ENPP2Q13822 863 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 SLC25A24Q6NUK1 477 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 GOLGA7Q7Z5G4 137 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 GPBP1Q86WP2 473 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CARM1Q86X55 608 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 APOBEC3FQ8IUX4 373 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 GRAMD2AQ8IUY3 354 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 PYROXD2Q8N2H3 581 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 WDR36Q8NI36 951 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 FBXO25Q8TCJ0 367 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NABP1Q96AH0 204 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NSMCE3Q96MG7 304 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 DUX3Q96PT4 197 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 RAB11FIP5Q9BXF6 653 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 STARD5Q9NSY2 213 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 TAS2R16Q9NYV7 291 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 TUBGCP4Q9UGJ1 667 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NAV1Q8NEY1 1877 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 KIF26BQ2KJY2 2108 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 SALL1Q9NSC2 1324 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 BAZ2AQ9UIF9 1905 aaKnown RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ARHGEF33A8MVX0 844 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 H0YL77 283 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 SNAP91O60641 907 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 MBD3O95983 291 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 OR9G9P0C7N8 305 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 PTPN6P29350 595 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ADORA1P30542 326 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 MATKP42679 507 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ATP12AP54707 1039 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 GSCP56915 257 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 CDKL1Q00532 357 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 VGLL4Q14135 290 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF146Q15072 292 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 DDI2Q5TDH0 399 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 WDR25Q64LD2 544 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 APOBEC3HQ6NTF7 200 aaKnown RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ZFAND4Q86XD8 727 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ARFGAP2Q8N6H7 521 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 RAB7BQ96AH8 199 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 APOOQ9BUR5 198 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF416Q9BWM5 594 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 LRRCC1Q9C099 1032 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 IL1RL2Q9HB29 575 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ADGRL4Q9HBW9 690 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 DEPPQ9NTK1 212 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 NDE1Q9NXR1 346 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 BARHL2Q9NY43 387 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 FBXO7Q9Y3I1 522 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 MFHAS1Q9Y4C4 1052 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 FKBP7Q9Y680 259 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 RANBP2P49792 3224 aaKnown RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 TRIOBPQ9H2D6 2365 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 IGLV7-46A0A075B6I9 117 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 A0A1B0GUL7 405 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 TFECO14948 347 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 OR4F21O95013 312 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ECDO95905 644 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 GOT2P00505 430 aaKnown RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 CCDC159P0C7I6 412 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 CALCBP10092 127 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 NDUFV3P56181 108 aaKnown RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 HILS1P60008 231 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 OVGP1Q12889 678 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 EMC2Q15006 297 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 CCDC57Q2TAC2 916 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ANKDD1AQ495B1 522 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 KLHL22Q53GT1 634 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 RHBDD2Q6NTF9 364 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 OR4F17Q8NGA8 305 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 SPPL2AQ8TCT8 520 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 HCAR2Q8TDS4 363 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 OPTNQ96CV9 577 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 PRICKLE1Q96MT3 831 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 OR4F4Q96R69 305 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 TEX13BQ9BXU2 312 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 BARHL1Q9BZE3 327 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 PARLQ9H300 379 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ALG9Q9H6U8 611 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 CHRNA9Q9UGM1 479 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 LAMP5Q9UJQ1 280 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF490Q9ULM2 529 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 RABL2BQ9UNT1 228 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 LAMA3Q16787 3333 aa3.07□□□□□ -1.92
SCFD1-207ENST00000544052 RPAP1Q9BWH6 1393 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 COL11A1P12107 1806 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-207ENST00000544052 A0A0G2JMZ2 1700 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 ZNFX1Q9P2E3 1918 aaKnown RBP3.06□□□□□ -1.92
SCFD1-207ENST00000544052 A0A0A6YYD4 124 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 RNF222A6NCQ9 220 aa3.06□□□□□ -1.92
SCFD1-207ENST00000544052 K7EQG2 157 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms