RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 RABL3Q5HYI8 236 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GCNT6Q5T4J0 391 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 BICRALQ6AI39 1079 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ZAR1Q86SH2 424 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SULF2Q8IWU5 870 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FBXW8Q8N3Y1 598 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 OR8J3Q8NGG0 315 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NSL1Q96IY1 281 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ECSITQ9BQ95 431 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 DOHHQ9BU89 302 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SH2D2AQ9NP31 389 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FLRT3Q9NZU0 649 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CNOT11Q9UKZ1 510 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 WDR45Q9Y484 360 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PCDHGB6Q9Y5F9 930 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PRAMEF25A6NGN4 478 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PEX1O43933 1283 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 RASAL1O95294 804 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 H6PDO95479 791 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 LCN1P31025 176 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 DNASE1L1P49184 302 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CLK3P49761 638 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MNAT1P51948 309 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FUT5Q11128 374 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GNA13Q14344 377 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SYPL1Q16563 259 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GRAMD1BQ3KR37 738 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TBCELQ5QJ74 424 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HACD2Q6Y1H2 254 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 OLIG3Q7RTU3 272 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ARPINQ7Z6K5 226 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 C10orf111Q8N326 155 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ANKFN1Q8N957 763 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 OR10A6Q8NH74 314 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GRHL3Q8TE85 626 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MAL2Q969L2 176 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 JSRP1Q96MG2 331 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TRNT1Q96Q11 434 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HOPXQ9BPY8 73 aaPredicted RBP13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FAM173AQ9BQD7 235 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 OSBPL11Q9BXB4 747 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TBL1XR1Q9BZK7 514 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ZNF350Q9GZX5 532 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 DEPPQ9NTK1 212 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MKLN1Q9UL63 735 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 L3MBTL1Q9Y468 752 aa13.28□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NINQ8N4C6 2090 aa13.27□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NPIPA5A0A0B4J1W7 369 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PRAMEF27A3QJZ7 478 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 C5orf58C9J3I9 102 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NPIPA7E9PJI5 369 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SCDO00767 359 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SCO2O43819 266 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FCMRO60667 390 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TNFRSF21O75509 655 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TFPTP0C1Z6 253 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NPIPA8P0DM63 369 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC6A2P23975 617 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 DCTP40126 519 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MASP1P48740 699 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MEOX1P50221 254 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CRISP3P54108 245 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SNTA1Q13424 505 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC30A6Q6NXT4 461 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PACS2Q86VP3 889 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF619Q8N2I2 560 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF614Q8N883 585 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 Q8NA96 180 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF527Q8NB42 609 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OR2M7Q8NG81 312 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OR4C3Q8NH37 302 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC38A5Q8WUX1 472 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TMEM19Q96HH6 336 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 BBC3Q96PG8 261 aaPredicted RBP13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ANGPTL4Q9BY76 406 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HOXD1Q9GZZ0 328 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PIF1Q9H611 641 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KAT8Q9H7Z6 458 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GALNT9Q9HCQ5 603 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 A4GALTQ9NPC4 353 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 UBQLN4Q9NRR5 601 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CALML5Q9NZT1 146 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ABCG2Q9UNQ0 655 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PCDHGA10Q9Y5H3 936 aa13.27□□□□□ -0.29
TNFRSF1A-216ENST00000543995 EPG5Q9HCE0 2579 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 A0A0G2JMM0 328 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 A0A1W2PPB8 328 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 A0A1W2PRS3 328 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ANKRD33BA6NCL7 494 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 C2orf72A6NCS6 295 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CCT8L1PA6NM43 557 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 EIF4E1BA6NMX2 242 aaKnown RBP13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KIR3DP1A8MWS1 328 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SNX4O95219 450 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OXSR1O95747 527 aaPredicted RBP13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CHRM4P08173 479 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 BMP2P12643 396 aa13.26□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CALB2P22676 271 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms