RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MAT1AQ00266 395 aaKnown RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 ZNF33BQ06732 778 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 CSTF3Q12996 717 aaKnown RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 ABRAXAS2Q15018 415 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 IMPG1Q17R60 797 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 SYT16Q17RD7 645 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 HYAL4Q2M3T9 481 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 MST1LQ2TV78 715 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 SLC9B1Q4ZJI4 515 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 TCHHL1Q5QJ38 904 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 SH2D4BQ5SQS7 431 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 CES4AQ5XG92 561 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 CLEC6AQ6EIG7 209 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 OR4C11Q6IEV9 310 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 PDSS2Q86YH6 399 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 CLYBLQ8N0X4 340 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 AMER3Q8N944 861 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 OR56B2PQ8NGI1 322 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 OR51Q1Q8NH59 317 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 RFWD2Q8NHY2 731 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 RAB3IL1Q8TBN0 382 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 AGR3Q8TD06 166 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 DTNBP1Q96EV8 351 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 SMIM10Q96HG1 83 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 NPLQ9BXD5 320 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 MS4A7Q9GZW8 240 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 AICDAQ9GZX7 198 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 ILKAPQ9H0C8 392 aaPredicted RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 ACTL8Q9H568 366 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 MANSC1Q9H8J5 431 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 WDR54Q9H977 334 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 CLK4Q9HAZ1 481 aaKnown RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 MED4Q9NPJ6 270 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 SLC22A11Q9NSA0 550 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 C14orf105Q9NVL8 296 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 VPS29Q9UBQ0 182 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 IL17BQ9UHF5 180 aa4.77□□□□□ -1.65
CLIP1-217ENST00000543205 NXT1Q9UKK6 140 aaKnown RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 MRPS18BQ9Y676 258 aaKnown RBP4.77□□□□□ -1.65
CLIP1-217ENST00000543205 ITPR1Q14643 2758 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 HEATR5BQ9P2D3 2071 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 A0A087WV48 116 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 FAM90A7PA6NKC0 464 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 FAM90A22PA8MWA6 464 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 FAM90A12PA8MX19 464 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 FAM90A23PA8MXZ1 464 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 C4orf51C9J302 202 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 MAGEB3O15480 346 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 RGS14O43566 566 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ITM2AO43736 263 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 HNRNPCL1O60812 293 aaKnown RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 LYPLA1O75608 230 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 CREG1O75629 220 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SEMA3DO95025 777 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ETHE1O95571 254 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 TBX6O95947 436 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 FGF4P08620 206 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 GLI4P10075 376 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 RNH1P13489 461 aaKnown RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 NR1D1P20393 614 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 HIST1H1TP22492 207 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 F8A1P23610 371 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ATP5A1P25705 553 aaKnown RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 CERS1P27544 350 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ITPKBP27987 946 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 TSFMP43897 325 aaKnown RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 XCR1P46094 333 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 FOXA1P55317 472 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 TMPRSS3P57727 454 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 RPS18P62269 152 aaKnown RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 TLE3Q04726 772 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SRSF6Q13247 344 aaKnown RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 VWA2Q5GFL6 755 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SPDYAQ5MJ70 313 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 FAM219BQ5XKK7 198 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 KANK2Q63ZY3 851 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 STEAP3Q658P3 488 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SCIMPQ6UWF3 145 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ATG14Q6ZNE5 492 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SHISA6Q6ZSJ9 500 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 COX15Q7KZN9 410 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 PAGE2Q7Z2X7 111 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 NUDT13Q86X67 352 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 GLB1L2Q8IW92 636 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 DDIASQ8IXT1 998 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 PRSS58Q8IYP2 241 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 KIRREL3Q8IZU9 778 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 CA13Q8N1Q1 262 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 GBP7Q8N8V2 638 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ACOT4Q8N9L9 421 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 TMEM116Q8NCL8 245 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 OR5T3Q8NGG3 340 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 ST7LQ8TDW4 575 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 STARD8Q92502 1023 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 PEX11GQ96HA9 241 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SLC45A3Q96JT2 553 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 QRFPRQ96P65 431 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 OR1F2PQ96R84 312 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 HBEGFQ99075 208 aa4.76□□□□□ -1.65
CLIP1-217ENST00000543205 SLC26A1Q9H2B4 701 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms