RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 BCL2A1Q16548 175 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 KCTD19Q17RG1 926 aaPredicted RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 ASTE1Q2TB18 679 aaPredicted RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 C18orf21Q32NC0 220 aaPredicted RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 C18orf63Q68DL7 685 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 MFSD12Q6NUT3 480 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 PAQR3Q6TCH7 311 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 LINC00114Q6XXX2 140 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 ZNF793Q6ZN11 406 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 NUP54Q7Z3B4 507 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 C1QL4Q86Z23 238 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 CCDC103Q8IW40 242 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 ST13P4Q8IZP2 240 aaPredicted RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 KRT78Q8N1N4 520 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 LINC01356Q8N9X3 169 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 BBOF1Q8ND07 529 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 TTLQ8NG68 377 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 OR4K17Q8NGC6 315 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 PIWIL2Q8TC59 973 aaKnown RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 ATG4AQ8WYN0 398 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 KCNJ9Q92806 393 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 GFM2Q969S9 779 aaKnown RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 FBXL8Q96CD0 374 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 OMA1Q96E52 524 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 RADILQ96JH8 1075 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 KCNC2Q96PR1 638 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 NAP1L3Q99457 506 aaPredicted RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 EGFL8Q99944 293 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 RBM4Q9BWF3 364 aaKnown RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 SORBS1Q9BX66 1292 aaKnown RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 HDHD5Q9BXW7 423 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 IL22Q9GZX6 179 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 NXF5Q9H1B4 397 aaKnown RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 OR10A5Q9H207 317 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 DSN1Q9H410 356 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 LPAR2Q9HBW0 351 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 LYRM4Q9HD34 91 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 AP5S1Q9NUS5 200 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 C14orf119Q9NWQ9 140 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 H2AFY2Q9P0M6 372 aaPredicted RBP4.23□□□□□ -1.73
LIMS1-214ENST00000542845 XPR1Q9UBH6 696 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 BCAP29Q9UHQ4 241 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 DUSP13Q9UII6 198 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 ATP23Q9Y6H3 246 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 CAPN6Q9Y6Q1 641 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 PMF1-BGLAPU3KQ54 211 aa4.23□□□□□ -1.73
LIMS1-214ENST00000542845 NBEAL2Q6ZNJ1 2754 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 A0A1W2PS29 197 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 NCF1BA6NI72 391 aaPredicted RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 CCT8L1PA6NM43 557 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 NCF1CA8MVU1 366 aaPredicted RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 VWC2LB2RUY7 222 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 UGT2B11O75310 529 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 LYZL6O75951 148 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 WDR47O94967 919 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 SYNGR4O95473 234 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 GPR75O95800 540 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 TBX6O95947 436 aaPredicted RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 CT62P0C5K7 136 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 RHOXF2BP0C7M4 288 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 PCNAP12004 261 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 FCGR2AP12318 317 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 NCF1P14598 390 aaPredicted RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 GNAZP19086 355 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 PSMB1P20618 241 aaKnown RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 NT5EP21589 574 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 STIP1P31948 543 aaKnown RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 CTNNA1P35221 906 aaKnown RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 SLC1A2P43004 574 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 ZNF83P51522 516 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 SCAND1P57086 179 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 B3GALT5-AS1P59052 145 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 HMGCS1Q01581 520 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 SPOCK1Q08629 439 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 FOXL1Q12952 345 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 BIKQ13323 160 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 SP140Q13342 867 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 KLF1Q13351 362 aaPredicted RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 CCNIQ14094 377 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 DHX34Q14147 1143 aaKnown RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 SLMAPQ14BN4 828 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 PPA1Q15181 289 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 FBLN7Q53RD9 439 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 FBXO48Q5FWF7 155 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 LGSNQ5TDP6 509 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 C6orf163Q5TEZ5 329 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 C11orf71Q6IPW1 123 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 LRRC8EQ6NSJ5 796 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 Q6ZS46 218 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 BHLHA15Q7RTS1 189 aaPredicted RBP4.22□□□□□ -1.73
LIMS1-214ENST00000542845 GPR180Q86V85 440 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 ANKS4BQ8N8V4 417 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 CCDC89Q8N998 374 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 C7orf57Q8NEG2 295 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 OR52B6Q8NGF0 335 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 TANKQ92844 425 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 HGDQ93099 445 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 ADIPOR1Q96A54 375 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 TMCO6Q96DC7 493 aa4.22□□□□□ -1.73
LIMS1-214ENST00000542845 MUCL1Q96DR8 90 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms