RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 OR6F1Q8NGZ6 308 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 WDR20Q8TBZ3 569 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 HLA-CQ95604 372 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ZNF75AQ96N20 296 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 NMNAT1Q9HAN9 279 aaPredicted RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 NMUR1Q9HB89 426 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ADAP2Q9NPF8 381 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 DKKL1Q9UK85 242 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 UNC13BO14795 1591 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 GABRPO00591 440 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 CIDEAO60543 219 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 SLC35G4P0C7Q5 338 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 PTBP1P26599 531 aaKnown RBP eCLIP8.31□□□□□ -1.08
YBX3-208ENST00000540447 CXADRP78310 365 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 MFSD6LQ8IWD5 586 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 RASD2Q96D21 266 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 NSUN5Q96P11 429 aaKnown RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 PGLYRP2Q96PD5 576 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 SPIN2AQ99865 258 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 SPIN2BQ9BPZ2 258 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 SGIP1Q9BQI5 828 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 TAPBPLQ9BX59 468 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 DCAF13Q9NV06 445 aaKnown RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 TESQ9UGI8 421 aaKnown RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 OR1F1O43749 312 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 AGR2O95994 175 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 PTHP01270 115 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 SCG5P05408 212 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 MAP2K6P52564 334 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 SLC25A11Q02978 314 aaKnown RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 SGCGQ13326 291 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ADIRFQ15847 76 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 TUSC1Q2TAM9 212 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ACSM3Q53FZ2 586 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ZC3H14Q6PJT7 736 aaKnown RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 DNM1P34Q6PK57 102 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 MBOAT1Q6ZNC8 495 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ZNF383Q8NA42 475 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 OR56A1Q8NGH5 318 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 TTC9Q92623 222 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ZNF599Q96NL3 588 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 NEUROD4Q9HD90 331 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ACOXLQ9NUZ1 547 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 BABAM2Q9NXR7 383 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ZNF586Q9NXT0 402 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 TNFSF13BQ9Y275 285 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 CDC42BPBQ9Y5S2 1711 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ARHGEF5Q12774 1597 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 PTNP21246 168 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 LIPAP38571 399 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 RAB7AP51149 207 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 FUT2Q10981 343 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 GRM7Q14831 915 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 CATSPEREQ5SY80 951 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 ATPAF1Q5TC12 328 aaPredicted RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 GALNT10Q86SR1 603 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 DYNC2LI1Q8TCX1 351 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 CNN2Q99439 309 aaKnown RBP8.31□□□□□ -1.08
YBX3-208ENST00000540447 MCHR1Q99705 422 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 CLEC4EQ9ULY5 219 aa8.31□□□□□ -1.08
YBX3-208ENST00000540447 OR2A25A4D2G3 310 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 RNF13O43567 381 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 CST3P01034 146 aaPredicted RBP8.3□□□□□ -1.08
YBX3-208ENST00000540447 KLK1P06870 262 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 CD1EP15812 388 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 SDHAP31040 664 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 ASPAP45381 313 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 AGTR2P50052 363 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 CLDN20P56880 219 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 PKIAP61925 76 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 RAB40BQ12829 278 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 PAGE3Q5JUK9 113 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 GGNBP1Q5YKI7 109 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 TMPRSS7Q7RTY8 843 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 TPRA1Q86W33 373 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 TEX26Q8N6G2 289 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 LFNGQ8NES3 379 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 OR2G2Q8NGZ5 317 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 NDRG1Q92597 394 aaKnown RBP8.3□□□□□ -1.08
YBX3-208ENST00000540447 OSMRQ99650 979 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 WDR18Q9BV38 432 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 SLC25A31Q9H0C2 315 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 DMAC2Q9NW81 257 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 PIM2Q9P1W9 311 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 NCDNQ9UBB6 729 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 DPP7Q9UHL4 492 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 PSORS1C1Q9UIG5 152 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 MRPS33Q9Y291 106 aaKnown RBP8.3□□□□□ -1.08
YBX3-208ENST00000540447 CROCC2H7BZ55 1655 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 C19orf81C9J6K1 198 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
YBX3-208ENST00000540447 ALDOCP09972 364 aaKnown RBP8.3□□□□□ -1.08
YBX3-208ENST00000540447 SMPD1P17405 629 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 NDUFV2P19404 249 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 RAB35Q15286 201 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 PCBP2Q15366 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
YBX3-208ENST00000540447 SLC5A12Q1EHB4 618 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 FAM171A1Q5VUB5 890 aa8.3□□□□□ -1.08
YBX3-208ENST00000540447 OR52W1Q6IF63 320 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms