RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CDYL2Q8N8U2 506 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 OR7G2Q8NG99 324 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 OR5M1Q8NGP8 315 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 OR6K3Q8NGY3 331 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 METTL6Q8TCB7 284 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 C16orf78Q8WTQ4 265 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 C1GALT1C1Q96EU7 318 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 GMPPAQ96IJ6 420 aaPredicted RBP11.22□□□□□ -0.61
COPS7A-211ENST00000540408 C1QTNF3Q9BXJ4 246 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 TBL1XR1Q9BZK7 514 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 C3orf14Q9HBI5 128 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 Q9N2J8 555 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF701Q9NV72 531 aaPredicted RBP11.22□□□□□ -0.61
COPS7A-211ENST00000540408 FAM120CQ9NX05 1096 aaKnown RBP11.22□□□□□ -0.61
COPS7A-211ENST00000540408 MCTS1Q9ULC4 181 aaKnown RBP11.22□□□□□ -0.61
COPS7A-211ENST00000540408 JMJD1CQ15652 2540 aa11.22□□□□□ -0.61
COPS7A-211ENST00000540408 A0A087WV62 115 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 EIF1AYO14602 144 aaKnown RBP11.21□□□□□ -0.61
COPS7A-211ENST00000540408 HS3ST1O14792 307 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 KLF4O43474 513 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 CRLF1O75462 422 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 SYNGR4O95473 234 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 TP53P04637 393 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-211ENST00000540408 LOXP28300 417 aaPredicted RBP11.21□□□□□ -0.61
COPS7A-211ENST00000540408 HSD17B3P37058 310 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 MAGEA12P43365 314 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 EIF1AXP47813 144 aaKnown RBP11.21□□□□□ -0.61
COPS7A-211ENST00000540408 RFX3P48380 749 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 NCBP2P52298 156 aaKnown RBP eCLIP11.21□□□□□ -0.61
COPS7A-211ENST00000540408 GTF2IRD2BQ6EKJ0 949 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 GTF2IRD2Q86UP8 949 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 ZNF611Q8N823 705 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 TRMT61AQ96FX7 289 aaKnown RBP11.21□□□□□ -0.61
COPS7A-211ENST00000540408 PLPPR2Q96GM1 343 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 TSPYL1Q9H0U9 437 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 GLRX2Q9NS18 164 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 DMGDHQ9UI17 866 aaKnown RBP11.21□□□□□ -0.61
COPS7A-211ENST00000540408 GRID1Q9ULK0 1009 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 STK38LQ9Y2H1 464 aa11.21□□□□□ -0.61
COPS7A-211ENST00000540408 C17orf51A8MQB3 221 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 A8MT66 165 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 B4DXG7 233 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 AQP8O94778 261 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 KCNH1O95259 989 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 IFNA2P01563 188 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 JUNP05412 331 aaKnown RBP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 THBDP07204 575 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 ANXA4P09525 319 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 DDCP20711 480 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 IL11P20809 199 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 CASQ1P31415 396 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 TIA1P31483 386 aaKnown RBP eCLIP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 IDUAP35475 653 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 RAE1P78406 368 aaKnown RBP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 BTKQ06187 659 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 C2orf80Q0P641 193 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 TNK1Q13470 666 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 GUSBP1Q15486 140 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 ETFDHQ16134 617 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 SPDYAQ5MJ70 313 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 PDSS1Q5T2R2 415 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 LGSNQ5TDP6 509 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 STAC2Q6ZMT1 411 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 C22orf34Q6ZV56 151 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 GPRIN3Q6ZVF9 776 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 MARCH3Q86UD3 253 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 WFDC8Q8IUA0 241 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 WDR75Q8IWA0 830 aaKnown RBP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 CDC26Q8NHZ8 85 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 PAFAH2Q99487 392 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 TACO1Q9BSH4 297 aaKnown RBP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 ACPTQ9BZG2 426 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 OR10A4Q9H209 315 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 NGBQ9NPG2 151 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 MIEF1Q9NQG6 463 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 DDX18Q9NVP1 670 aaKnown RBP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 NINJ2Q9NZG7 142 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 ZNF225Q9UK10 706 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 ADAM21Q9UKJ8 722 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 C19orf53Q9UNZ5 99 aaPredicted RBP11.2□□□□□ -0.62
COPS7A-211ENST00000540408 LAMP3Q9UQV4 416 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 GPR52Q9Y2T5 361 aa11.2□□□□□ -0.62
COPS7A-211ENST00000540408 ESYT3A0FGR9 886 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 TTC36A6NLP5 189 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 MYO1GB0I1T2 1018 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 POC1B-GALNT4F8VUJ3 575 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 GMFGO60234 142 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
COPS7A-211ENST00000540408 IL33O95760 270 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 ANGPTL1O95841 491 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 CHN1P15882 459 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 NTSP30990 170 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 RPS4XP62701 263 aaKnown RBP11.19□□□□□ -0.62
COPS7A-211ENST00000540408 SLC7A5Q01650 507 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 DMTNQ08495 405 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 VEZF1Q14119 521 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 CLEC12BQ2HXU8 276 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 TCHHL1Q5QJ38 904 aaPredicted RBP11.19□□□□□ -0.62
COPS7A-211ENST00000540408 HEPHL1Q6MZM0 1159 aa11.19□□□□□ -0.62
COPS7A-211ENST00000540408 ALKBH2Q6NS38 261 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms