RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 C3orf33Q6P1S2 294 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 KLBQ86Z14 1044 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 CHST14Q8NCH0 376 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 FAM46DQ8NEK8 389 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 TMIEQ8NEW7 156 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 OR4C15Q8NGM1 316 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DNAJB8Q8NHS0 232 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 MRPL38Q96DV4 380 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 WDR89Q96FK6 387 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 C14orf144Q96I85 54 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC6A18Q96N87 628 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 OR4K3Q96R72 315 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 UBL7Q96S82 380 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DPH2Q9BQC3 489 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 TMPRSS13Q9BYE2 586 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 GSDMCQ9BYG8 508 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 CHMP1AQ9HD42 196 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 TLR8Q9NR97 1041 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 RPS6KB2Q9UBS0 482 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 DUX4Q9UBX2 424 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 CCL27Q9Y4X3 112 aa8.91□□□□□ -0.98
CTNNA1-243ENST00000540387 SHISA3A0PJX4 238 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 AGAP14A8MT82 685 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 I6L893 689 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 ARPC5O15511 151 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 IGF2P01344 180 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 EPCAMP16422 314 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 DRD5P21918 477 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 FGF9P31371 208 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 CXCR3P49682 368 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 RGS19P49795 217 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 SEC61A1P61619 476 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 OR5M10Q6IEU7 315 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PAQR3Q6TCH7 311 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 B3GLCTQ6Y288 498 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 NAA40Q86UY6 237 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PTOV1Q86YD1 416 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 SYNPOQ8N3V7 929 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 OR56B4Q8NH76 319 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PSMG2Q969U7 264 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 TIFAQ96CG3 184 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 MAPKAP1Q9BPZ7 522 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 C7orf50Q9BRJ6 194 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 DERL2Q9GZP9 239 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC25A32Q9H2D1 315 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 MFSD1Q9H3U5 465 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 CYSLTR2Q9NS75 346 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 MGAT4CQ9UBM8 478 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 ACSL6Q9UKU0 697 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 C2orf78A6NCI8 922 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF840PA6NDX5 716 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC9B1P1A6NJY1 282 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 RHPN2P1A8MT19 583 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 E9PI62 339 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 KLK8O60259 260 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 STX11O75558 287 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 SNAPC5O75971 98 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 LRG1P02750 347 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF8P17098 575 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 NPR2P20594 1047 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 ETV5P41161 510 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 GCGRP47871 477 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 CRYBA2P53672 197 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 SPIBQ01892 262 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 EFEMP1Q12805 493 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PDZK1IP1Q13113 114 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 EIF4EBP2Q13542 120 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 RNLSQ5VYX0 342 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 SIAH3Q8IW03 269 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 HS6ST3Q8IZP7 471 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 CA5BP1Q8WTZ4 195 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 WNT2BQ93097 391 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 FBXO17Q96EF6 278 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 TSSK6Q9BXA6 273 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 ZCCHC2Q9C0B9 1178 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 WDCPQ9H6R7 721 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 BARX1Q9HBU1 254 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 CA10Q9NS85 328 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PCDHGC4Q9Y5F7 938 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PCDHGA5Q9Y5G8 931 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PCDHGA1Q9Y5H4 931 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 HCFC2Q9Y5Z7 792 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 AP1M2Q9Y6Q5 423 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 PIAS3Q9Y6X2 628 aa8.9□□□□□ -0.98
CTNNA1-243ENST00000540387 TRIOBPQ9H2D6 2365 aa8.9□□□□□ -0.99
CTNNA1-243ENST00000540387 WASH3PC4AMC7 463 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 PHYHO14832 338 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 MID1O15344 667 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 CCL16O15467 120 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 TLR5O60602 858 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 CDC123O75794 336 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 SPDEFO95238 335 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 ADH1CP00326 375 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 IGLV3-25P01717 112 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 HEXBP07686 556 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 GIPP09681 153 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 PRG2P13727 222 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 ACPPP15309 386 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 TNFRSF1BP20333 461 aa8.89□□□□□ -0.99
CTNNA1-243ENST00000540387 S100A3P33764 101 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms