RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ZG16BQ96DA0 208 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 LHPPQ9H008 270 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 MUC13Q9H3R2 512 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CALML5Q9NZT1 146 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ZNF451Q9Y4E5 1061 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 NPFFR2Q9Y5X5 522 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 DSPPQ9NZW4 1301 aa17.43■□□□□ 0.38
TNFRSF1A-213ENST00000540022 A0A0G2JPF8 293 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 HNRNPCL2B2RXH8 293 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 HNRNPCL3B7ZW38 293 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 M0QX08 132 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ATXN7O15265 892 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TSPAN2O60636 221 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 REM1O75628 298 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 DNAJB5O75953 348 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 HNRNPCL4P0DMR1 293 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ATP6V1B2P21281 511 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 KDELR2P33947 212 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ST13P50502 369 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CRYBA2P53672 197 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SOX8P57073 446 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PSPHP78330 225 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TRAP1Q12931 704 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GPR68Q15743 365 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PRAMEF8Q5VWM4 474 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PRAMEF7Q5VXH5 474 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 AP1ARQ63HQ0 302 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CYP2R1Q6VVX0 501 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CCDC80Q76M96 950 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 DHFR2Q86XF0 187 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GALNT16Q8N428 558 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 BBS10Q8TAM1 723 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SLC22A8Q8TCC7 542 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 WDR60Q8WVS4 1066 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 DIO2Q92813 273 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ADOQ96SZ5 270 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 G6PC3Q9BUM1 346 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SAP130Q9H0E3 1048 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 QRSL1Q9H0R6 528 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GORASP2Q9H8Y8 452 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 YARS2Q9Y2Z4 477 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 NPIPA5A0A0B4J1W7 369 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 NPIPA7E9PJI5 369 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ERVH48-1M5A8F1 160 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 KIAA0513O60268 411 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CIB2O75838 187 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 OPN1SWP03999 348 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GUSBP08236 651 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 NPIPA8P0DM63 369 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ATP6V1C1P21283 382 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 POLE2P56282 527 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 RHDQ02161 417 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FLOT2Q14254 428 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 LRRC23Q53EV4 343 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CRB2Q5IJ48 1285 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ACER2Q5QJU3 275 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 C1orf146Q5VVC0 180 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 LCN8Q6JVE9 175 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 HMGN2P46Q86SG4 172 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SPPL2CQ8IUH8 684 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ZNF619Q8N2I2 560 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SLC15A4Q8N697 577 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 TTC9Q92623 222 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ZBTB20Q9HC78 741 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 POLE3Q9NRF9 147 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 MRTO4Q9UKD2 239 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 KCNMB2Q9Y691 235 aa17.42■□□□□ 0.38
TNFRSF1A-213ENST00000540022 BSNQ9UPA5 3926 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CENPVL1A0A0U1RR11 272 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 A6NL46 340 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GMNNO75496 209 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PPM1BO75688 479 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ALPPP05187 535 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ETS2P15036 469 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 IL12BP29460 328 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 KRT20P35900 424 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SOX3P41225 446 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PSMD4P55036 377 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FLYWCH1Q4VC44 716 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PATL1Q86TB9 770 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 SLC39A7Q92504 469 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FAM162AQ96A26 154 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 NSMCE2Q96MF7 247 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 COL21A1Q96P44 957 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 RSPO3Q9BXY4 272 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 MTHFD2LQ9H903 347 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FLRT3Q9NZU0 649 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 KCNE5Q9UJ90 142 aa17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 GPC6Q9Y625 555 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-213ENST00000540022 UGT2B11O75310 529 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 UGT2B17O75795 530 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FBXO45P0C2W1 286 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CYP4B1P13584 511 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 NAGAP17050 411 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 ERFP50548 548 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 CCL11P51671 97 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 PNLIPRP2P54317 469 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 FBXW4P57775 412 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 RAPSNQ13702 412 aa17.4■□□□□ 0.38
TNFRSF1A-213ENST00000540022 MAPK14Q16539 360 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms