RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 B9A039 149 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 PRMT5O14744 637 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 LZTS3O60299 673 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 MOSPD3O75425 235 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ATG12O94817 140 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ONECUT2O95948 504 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 HNRNPA1P09651 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX55-206ENST00000539934 C1QTNF9P0C862 333 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 HLA-EP13747 358 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 PSMB6P28072 239 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 DDTP30046 118 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 FMO3P31513 532 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 PLA2G16P53816 162 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 CXCR4P61073 352 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ATP6AP1Q15904 470 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 FAM78AQ5JUQ0 283 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 LIPMQ5VYY2 423 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 LAIR1Q6GTX8 287 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ACSM5Q6NUN0 579 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 NXPE4Q6UWF7 544 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 PRSS57Q6UWY2 283 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ISCA2Q86U28 154 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 CDK20Q8IZL9 346 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 C8orf59Q8N0T1 100 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 CELF5Q8N6W0 485 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 FAM3CQ92520 227 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 RHOVQ96L33 236 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 SORCS2Q96PQ0 1159 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 IFT27Q9BW83 186 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 FUNDC2Q9BWH2 189 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 UGT2B28Q9BY64 529 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 COQ10BQ9H8M1 238 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 TMEM184CQ9NVA4 438 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 GFOD1Q9NXC2 390 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 METTL1Q9UBP6 276 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 MOKQ9UQ07 419 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 FNDC3AQ9Y2H6 1198 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 C2orf92A0A1B0GVN3 265 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 UBA6A0AVT1 1052 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 NEMP2A6NFY4 417 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 WASH3PC4AMC7 463 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 E7ENX8 843 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 LGI1O95970 557 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 IGSF6O95976 241 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 SBK3P0C264 359 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 SPP1P10451 314 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ARSBP15848 533 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ATP6V1B2P21281 511 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ADH6P28332 368 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 PTGFRP43088 359 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 STC1P52823 247 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 BCL2L1Q07817 233 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 MRPL49Q13405 166 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 TP53BP2Q13625 1128 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 RNASE10Q5GAN6 216 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 FAM199XQ6PEV8 388 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 TMEM25Q86YD3 366 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 NLGN4XQ8N0W4 816 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 ZNF687Q8N1G0 1237 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 STK40Q8N2I9 435 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 TMEM151AQ8N4L1 468 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 RPL10LQ96L21 214 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 GPR78Q96P69 363 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 FAM129BQ96TA1 746 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 MRPL57Q9BQC6 102 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 TMED9Q9BVK6 235 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 GATA5Q9BWX5 397 aaPredicted RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 SORBS1Q9BX66 1292 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 LHPPQ9H008 270 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 HEXA-AS1Q9H8Q6 139 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 BPIFA1Q9NP55 256 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 INTS6Q9UL03 887 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 PRPF19Q9UMS4 504 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 STUB1Q9UNE7 303 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 MRPS17Q9Y2R5 130 aaKnown RBP11.84□□□□□ -0.51
DDX55-206ENST00000539934 U3KQV3 271 aa11.84□□□□□ -0.51
DDX55-206ENST00000539934 LRRTM2O43300 516 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 SUV39H1O43463 412 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 NPHS1O60500 1241 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 PRSS56P0CW18 603 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FCARP24071 287 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 MC4RP32245 332 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 MAPK8P45983 427 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 CXCL12P48061 93 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 MAPK10P53779 464 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 CDKN2DP55273 166 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 SLC25A3Q00325 362 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 AKIRIN2Q53H80 203 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 XAF1Q6GPH4 301 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 GK5Q6ZS86 529 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 PAQR7Q86WK9 346 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 ZNF383Q8NA42 475 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 FAM83FQ8NEG4 500 aaPredicted RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 CD300LFQ8TDQ1 290 aa11.83□□□□□ -0.52
DDX55-206ENST00000539934 CCDC124Q96CT7 223 aaKnown RBP11.83□□□□□ -0.52
DDX55-206ENST00000539934 PPIL3Q9H2H8 161 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms