RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 UCN3Q969E3 161 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 C16orf58Q96GQ5 468 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 SGCZQ96LD1 299 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 RBM4BQ9BQ04 359 aaKnown RBP10.92□□□□□ -0.66
VTN-202ENST00000539746 ZNF559Q9BR84 538 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 YIPF4Q9BSR8 244 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 FNDC11Q9BVV2 318 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 RBM4Q9BWF3 364 aaKnown RBP10.92□□□□□ -0.66
VTN-202ENST00000539746 ITPAQ9BY32 194 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 DPH1Q9BZG8 443 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 SPRY4Q9C004 299 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 TRIM2Q9C040 744 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 SLC38A1Q9H2H9 487 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 TMEM27Q9HBJ8 222 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 EXOSC3Q9NQT5 275 aaKnown RBP10.92□□□□□ -0.66
VTN-202ENST00000539746 KIF17Q9P2E2 1029 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 RPS6KB2Q9UBS0 482 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 ERVK-11Q9UQG0 969 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 ZNF443Q9Y2A4 671 aaPredicted RBP10.92□□□□□ -0.66
VTN-202ENST00000539746 ENPP4Q9Y6X5 453 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 ADAMTS20P59510 1910 aa10.92□□□□□ -0.66
VTN-202ENST00000539746 NUP210LQ5VU65 1888 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 TRBV11-1A0A0K0K1C0 115 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 A8MUA0 341 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 G3V2T6 193 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 GTPBP1O00178 669 aaKnown RBP10.91□□□□□ -0.66
VTN-202ENST00000539746 HYAL3O43820 417 aaPredicted RBP10.91□□□□□ -0.66
VTN-202ENST00000539746 EIF4E2O60573 245 aaKnown RBP10.91□□□□□ -0.66
VTN-202ENST00000539746 REM1O75628 298 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 LGI1O95970 557 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 NUDT7P0C024 238 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 CT62P0C5K7 136 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 CT45A8P0DMV1 189 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 CT45A9P0DMV2 189 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 ZNF23P17027 643 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 ZNF28P17035 718 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 FPR1P21462 350 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 TBXA2RP21731 343 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 FKBP2P26885 142 aaKnown RBP10.91□□□□□ -0.66
VTN-202ENST00000539746 MSX1P28360 303 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 DCTP40126 519 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 ETV5P41161 510 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 PTDSS1P48651 473 aaKnown RBP10.91□□□□□ -0.66
VTN-202ENST00000539746 GPR143P51810 404 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 RGS8P57771 180 aaPredicted RBP10.91□□□□□ -0.66
VTN-202ENST00000539746 SESN3P58005 492 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 ST3GAL3Q11203 375 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 GPR68Q15743 365 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 GRAMD1BQ3KR37 738 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 CT45A2Q5DJT8 189 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 WLSQ5T9L3 541 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 TYW3Q6IPR3 259 aaKnown RBP10.91□□□□□ -0.66
VTN-202ENST00000539746 FRRS1Q6ZNA5 592 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 ZBTB49Q6ZSB9 765 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 CDK20Q8IZL9 346 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 BCORP1Q8N888 145 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 OR5K1Q8NHB7 308 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 SLC38A4Q969I6 547 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 TAMM41Q96BW9 452 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 MPP4Q96JB8 637 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 TRIM8Q9BZR9 551 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 ATP13A2Q9NQ11 1180 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 WDR70Q9NW82 654 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 MYOTQ9UBF9 498 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 SH3GLB1Q9Y371 365 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 CLDN16Q9Y5I7 305 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
VTN-202ENST00000539746 ZNF891A8MT65 544 aaPredicted RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 A8MUI8 341 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 PPM1BO75688 479 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 SEC24DO94855 1032 aaPredicted RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 OR5F1O95221 314 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 CHRM4P08173 479 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 ANXA8P13928 327 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 RPS4Y1P22090 263 aaKnown RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 OTX2P32243 289 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 SOX11P35716 441 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 HTR3AP46098 478 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 SSR4P51571 173 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 NR0B1P51843 470 aaKnown RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 KCNJ10P78508 379 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 CHRNEQ04844 493 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 MEP1AQ16819 746 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 RSPO4Q2I0M5 234 aaPredicted RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 FAAH2Q6GMR7 532 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 SHQ1Q6PI26 577 aaKnown RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 C5orf46Q6UWT4 87 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 LAPTM4BQ86VI4 370 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 NFAM1Q8NET5 270 aaPredicted RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 OR11G2Q8NGC1 345 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 ELP5Q8TE02 316 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 DNAJA4Q8WW22 397 aaPredicted RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 ADIPOR1Q96A54 375 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 PRRC1Q96M27 445 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 HS6ST2Q96MM7 605 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 ZNF300Q96RE9 604 aaPredicted RBP10.9□□□□□ -0.66
VTN-202ENST00000539746 NUDT9Q9BW91 350 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 PRRG3Q9BZD7 231 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 CNIH4Q9P003 139 aa10.9□□□□□ -0.66
VTN-202ENST00000539746 MKLN1Q9UL63 735 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms