RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 KCNN2Q9H2S1 579 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 KLHL31Q9H511 634 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 TMEM39AQ9NV64 488 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 STMN3Q9NZ72 180 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 PTGFRNQ9P2B2 879 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 HSPB11Q9Y547 144 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 NOTCH4Q99466 2003 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 HTTP42858 3142 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 PRRC2BQ5JSZ5 2229 aaKnown RBP9.04□□□□□ -0.96
CDH13-204ENST00000539548 FRS3O43559 492 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 HRO43593 1189 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 PRKRAO75569 313 aaKnown RBP9.04□□□□□ -0.96
CDH13-204ENST00000539548 NTN1O95631 604 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 NFATC1O95644 943 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 PRKAR1BP31321 381 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 PTGER1P34995 402 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 ATP6V1E1P36543 226 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 NUDT1P36639 197 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 PRR5P85299 388 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 SHC2P98077 582 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 DUSP2Q05923 314 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 PRDX1Q06830 199 aaKnown RBP9.04□□□□□ -0.96
CDH13-204ENST00000539548 ANGPT1Q15389 498 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 CEP78Q5JTW2 689 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 IDNKQ5T6J7 187 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 HBMQ6B0K9 141 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 SIGIRRQ6IA17 410 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 TMEM107Q6UX40 140 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 ZNF620Q6ZNG0 422 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 MBOAT2Q6ZWT7 520 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 NR2C2APQ86WQ0 139 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 NKAIN4Q8IVV8 208 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 FAM109AQ8N4B1 249 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 LINC01555Q8NAE3 123 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 BBS1Q8NFJ9 593 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 TOR1AIP2Q8NFQ8 470 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 CNRIP1Q96F85 164 aaPredicted RBP9.04□□□□□ -0.96
CDH13-204ENST00000539548 CITED4Q96RK1 184 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 THAP7Q9BT49 309 aaPredicted RBP9.04□□□□□ -0.96
CDH13-204ENST00000539548 MKRN2Q9H000 416 aaKnown RBP9.04□□□□□ -0.96
CDH13-204ENST00000539548 POLMQ9NP87 494 aaPredicted RBP9.04□□□□□ -0.96
CDH13-204ENST00000539548 PRDM7Q9NQW5 492 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 BABAM2Q9NXR7 383 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 KLHL28Q9NXS3 571 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 B3GNT2Q9NY97 397 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 NLGN3Q9NZ94 848 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 CES1P1Q9UKY3 287 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 SLC27A6Q9Y2P4 619 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 HCFC2Q9Y5Z7 792 aa9.04□□□□□ -0.96
CDH13-204ENST00000539548 A0A0A6YYJ9 748 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 IGKV1-8A0A0C4DH67 115 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 EDDM13A0A1B0GTR0 161 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SMLR1H3BR10 107 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 SOCS6O14544 535 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 RFPL3O75679 317 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 OR5F1O95221 314 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 CRYZL1O95825 349 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 RHOP08100 348 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ALPPL2P10696 532 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 CD53P19397 219 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 CSNK2A2P19784 350 aaPredicted RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 GPR4P46093 362 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ZNF750Q32MQ0 723 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 HNRNPA1L2Q32P51 320 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 HACD4Q5VWC8 232 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ZNF782Q6ZMW2 699 aaPredicted RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 CXXC5Q7LFL8 322 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 GDF7Q7Z4P5 450 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ADCK2Q7Z695 626 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 CPOQ8IVL8 374 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 GID4Q8IVV7 300 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 NRMQ8IXM6 262 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 C9orf62Q8N4C0 152 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ACBD7Q8N6N7 88 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 OR2T33Q8NG76 320 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 OR5H6Q8NGV6 325 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 KLK6Q92876 244 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 RFT1Q96AA3 541 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 MS4A6EQ96DS6 147 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 AHCYL2Q96HN2 611 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 ZSWIM3Q96MP5 696 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ISG20L2Q9H9L3 353 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 HINT3Q9NQE9 182 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 TM7SF3Q9NS93 570 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 IMP3Q9NV31 184 aaKnown RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 NCKAP1Q9Y2A7 1128 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ATG4BQ9Y4P1 393 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 IRAK3Q9Y616 596 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 PRR23AA6NEV1 266 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 C12orf71A8MTZ7 269 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 DVL2O14641 736 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 LANCL1O43813 399 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 NOS1APO75052 506 aaPredicted RBP9.03□□□□□ -0.96
CDH13-204ENST00000539548 SLC2A10O95528 541 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 DHFRP00374 187 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 PAHP00439 452 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 THY1P04216 161 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 ADH5P11766 374 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 NDUFV2P19404 249 aa9.03□□□□□ -0.96
CDH13-204ENST00000539548 NPR2P20594 1047 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms