RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 GALNT12Q8IXK2 581 aa23.24■■□□□ 1.31
RAB40C-204ENST00000538492 PEX5LQ8IYB4 626 aa23.24■■□□□ 1.31
RAB40C-204ENST00000538492 CPMP14384 443 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 CPEP16870 476 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 CD79BP40259 229 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 TPMTP51580 245 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 DECR1Q16698 335 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 FRMD1Q8N878 549 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 TOR4AQ9NXH8 423 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 NTMQ9P121 344 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 ZNF232Q9UNY5 417 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 SLC22A7Q9Y694 548 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 MINDY4Q4G0A6 757 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 DESI1Q6ICB0 168 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 LHFPL3Q86UP9 236 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 LAX1Q8IWV1 398 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 FAM3CQ92520 227 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 PILRAQ9UKJ1 303 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 TRIOO75962 3097 aa23.23■■□□□ 1.31
RAB40C-204ENST00000538492 SNTNA6NMZ2 147 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 TNFSF14O43557 240 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 LARS2Q15031 903 aaKnown RBP23.22■■□□□ 1.31
RAB40C-204ENST00000538492 ARHGAP11BQ3KRB8 267 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 LAPTM4BQ86VI4 370 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 ZFP41Q8N8Y5 198 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 OR5T3Q8NGG3 340 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 ITPKCQ96DU7 683 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 SDF2Q99470 211 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 ANKRD19PQ9H560 264 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 CACYBPQ9HB71 228 aaKnown RBP23.22■■□□□ 1.31
RAB40C-204ENST00000538492 EVA1BQ9NVM1 165 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 SMIM30A4D0T7 59 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 URADA6NGE7 173 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 H0YGG7 62 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 PTTG1O95997 202 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 CLEC2LP0C7M8 214 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 FPR3P25089 353 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 LSSP48449 732 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 ARF3P61204 181 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-204ENST00000538492 RPS25P62851 125 aaKnown RBP23.22■■□□□ 1.31
RAB40C-204ENST00000538492 MAPK14Q16539 360 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 ABHD13Q7L211 337 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 SAMD14Q8IZD0 417 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-204ENST00000538492 TMEM52Q8NDY8 209 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 PIK3R3Q92569 461 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 FGF20Q9NP95 211 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-204ENST00000538492 INIPQ9NRY2 104 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 PIAS3Q9Y6X2 628 aa23.22■■□□□ 1.31
RAB40C-204ENST00000538492 CDC42EP2O14613 210 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 SLC2A10O95528 541 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 IMPDH2P12268 514 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 MAGEA10P43363 369 aaPredicted RBP23.21■■□□□ 1.31
RAB40C-204ENST00000538492 CDH11P55287 796 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 RUNX1T1Q06455 604 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 USP53Q70EK8 1073 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 OR8H2Q8N162 312 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 CAMKVQ8NCB2 501 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 PSD4Q8NDX1 1056 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 OR4F15Q8NGB8 312 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 RPLP0P6Q8NHW5 317 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 TM9SF2Q99805 663 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 ZFYVE21Q9BQ24 234 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 MRPS18AQ9NVS2 196 aaKnown RBP23.21■■□□□ 1.31
RAB40C-204ENST00000538492 FBXO34Q9NWN3 711 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 PRUNE2Q8WUY3 3088 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 NPIPA5A0A0B4J1W7 369 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 KDM4EB2RXH2 506 aaPredicted RBP23.21■■□□□ 1.31
RAB40C-204ENST00000538492 NPIPA7E9PJI5 369 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 SSX4O60224 188 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 AGR2O95994 175 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 GKN3PP0CG01 181 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 NPIPA8P0DM63 369 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 PRG2P13727 222 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 ZMAT1Q5H9K5 638 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 Q6ZSR6 202 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 MBOAT2Q6ZWT7 520 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 GDPD3Q7L5L3 318 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 RBM12BQ8IXT5 1001 aaKnown RBP23.21■■□□□ 1.31
RAB40C-204ENST00000538492 BBS1Q8NFJ9 593 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 ASB15Q8WXK1 588 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 OSTF1Q92882 214 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 RERGQ96A58 199 aaPredicted RBP23.21■■□□□ 1.31
RAB40C-204ENST00000538492 C1GALT1C1Q96EU7 318 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 IL20Q9NYY1 176 aa23.21■■□□□ 1.31
RAB40C-204ENST00000538492 SURF4O15260 269 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 FGF17O60258 216 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 ATP6V1G1O75348 118 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 LIMS3P0CW19 117 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 LIMS4P0CW20 117 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 HTR4Q13639 388 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF628Q5EBL2 1059 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 ZNF542PQ5EBM4 170 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 ARSGQ96EG1 525 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 PRRG3Q9BZD7 231 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 TCEAL2Q9H3H9 227 aaPredicted RBP23.2■■□□□ 1.3
RAB40C-204ENST00000538492 PTGFRNQ9P2B2 879 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 CSNK1G3Q9Y6M4 447 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 OR5F1O95221 314 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 STAT5AP42229 794 aa23.2■■□□□ 1.3
RAB40C-204ENST00000538492 BNC1Q01954 994 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms