RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CCDC106Q9BWC9 280 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 C1orf43Q9BWL3 253 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 KLHL4Q9C0H6 718 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 AICDAQ9GZX7 198 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SLC26A1Q9H2B4 701 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TUBB1Q9H4B7 451 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 RPF2Q9H7B2 306 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 AKIRIN1Q9H9L7 192 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 MEAF6Q9HAF1 191 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 S100A14Q9HCY8 104 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SLAMF7Q9NQ25 335 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 MIEF1Q9NQG6 463 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 PRTFDC1Q9NRG1 225 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SLC22A11Q9NSA0 550 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 GIMAP4Q9NUV9 329 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 PTTG2Q9NZH5 202 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 C19orf25Q9UFG5 118 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SLC7A8Q9UHI5 535 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SLC45A2Q9UMX9 530 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 DAPP1Q9UN19 280 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 EIF3LQ9Y262 564 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FARSAQ9Y285 508 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 MMACHCQ9Y4U1 282 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 POLR3HQ9Y535 204 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SCN3AQ9NY46 2000 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FRYLO94915 3013 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 MYO15AQ9UKN7 3530 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 SPTBP11277 2137 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 NUP210LQ5VU65 1888 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 SPTBN4Q9H254 2564 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 C15orf38-AP3S2A0A0A6YYH1 394 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 GOLGA8QA0A0J9YX86 632 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 LOC101059948A0A1B0GTJ6 334 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 C1orf226A1L170 272 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 GOLGA8OA6NCC3 632 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 GLOD5A6NK44 160 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 VSTM2BA6NLU5 285 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 FAM227AF5H4B4 570 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 GOLGA8NF8WBI6 632 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 H3BML4 177 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 CYR61O00622 381 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PROM1O43490 865 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 TLX3O43711 291 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PEX1O43933 1283 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 OR10H2O60403 315 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 ALOX12BO75342 701 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 JRKO75564 520 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 KLF7O75840 302 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-208ENST00000538266 GPANK1O95872 356 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 IGHEP01854 428 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 IFNA16P05015 189 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 ELANEP08246 267 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PABPC4LP0CB38 370 aaKnown RBP4.01□□□□□ -1.77
SNHG1-208ENST00000538266 ZCCHC18P0CG32 403 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PRPS2P11908 318 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 IDO1P14902 403 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 UQCRBP14927 111 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 LBPP18428 481 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 SDC1P18827 310 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PRPS1L1P21108 318 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 MAOAP21397 527 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PRPH2P23942 346 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 MMP11P24347 488 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PIK3R1P27986 724 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 EPHA3P29320 983 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 NTSP30990 170 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PTGS2P35354 604 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 CPOXP36551 454 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 RPL3P39023 403 aaKnown RBP4.01□□□□□ -1.77
SNHG1-208ENST00000538266 HSPA13P48723 471 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 EMP2P54851 167 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 TAS2R50P59544 299 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 STX1BP61266 288 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 RPS18P62269 152 aaKnown RBP4.01□□□□□ -1.77
SNHG1-208ENST00000538266 ERVK-8P63133 956 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 NKX6-1P78426 367 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-208ENST00000538266 PLIN5Q00G26 463 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 TLE3Q04726 772 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 EMX2Q04743 252 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 CDC20Q12834 499 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 RUNX2Q13950 521 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 SERTAD2Q14140 314 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 ERV3-1Q14264 604 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 RPS6KA2Q15349 733 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 SMU1Q2TAY7 513 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 MMEL1Q495T6 779 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 SPDYE7PQ495Y7 208 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 TIGD2Q4W5G0 525 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 RFTN2Q52LD8 501 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-208ENST00000538266 C6orf136Q5SQH8 315 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 VWA5B1Q5TIE3 1220 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 FAM69BQ5VUD6 431 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 IL23RQ5VWK5 629 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 C18orf63Q68DL7 685 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 FAAH2Q6GMR7 532 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 QSOX2Q6ZRP7 698 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 Q6ZSR9 355 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 IKBIPQ70UQ0 350 aa4.01□□□□□ -1.77
SNHG1-208ENST00000538266 R3HCC1LQ7Z5L2 792 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms