RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 FCMRO60667 390 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 UTS2O95399 124 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 CHRM4P08173 479 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 ALOX5P09917 674 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 ZCCHC18P0CG32 403 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 ETFAP13804 333 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 CNR1P21554 472 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 MATN1P21941 496 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 MAGEA5P43359 124 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 PRIM2P49643 509 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 PNLIPRP2P54317 469 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 NRG3P56975 720 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 KCNK10P57789 538 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 INAQ16352 499 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 MAPK14Q16539 360 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.96□□□□□ -0.49
CHFR-216ENST00000538235 NDUFAF6Q330K2 333 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 CYP27C1Q4G0S4 372 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 C6orf10Q5SRN2 563 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 DCST2Q5T1A1 773 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 METTL21CQ5VZV1 264 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 SLC22A10Q63ZE4 541 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 TMEM81Q6P7N7 255 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 SNX32Q86XE0 403 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 ANKFN1Q8N957 763 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 TMEM125Q96AQ2 219 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 BTBD2Q9BX70 525 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 OSBPL11Q9BXB4 747 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 UBQLN3Q9H347 655 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 TPT1P8Q9HAU6 139 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 GMPR2Q9P2T1 348 aaKnown RBP11.96□□□□□ -0.49
CHFR-216ENST00000538235 VPS4AQ9UN37 437 aa11.96□□□□□ -0.49
CHFR-216ENST00000538235 NCOA6Q14686 2063 aaPredicted RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 ANKRD33BA6NCL7 494 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 GNB5O14775 395 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 SNPHO15079 494 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 ABCB7O75027 752 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 TNFRSF21O75509 655 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 OXSR1O95747 527 aaPredicted RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 DDX5P17844 614 aaKnown RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 IL12BP29460 328 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 EVI2BP34910 448 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 POU6F2P78424 691 aaPredicted RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 SRSF1Q07955 248 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHFR-216ENST00000538235 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 CAPRIN1Q14444 709 aaKnown RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 SYPL1Q16563 259 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 REP15Q6BDI9 236 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 OR5M10Q6IEU7 315 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 ZCCHC12Q6PEW1 402 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 FAM180AQ6UWF9 173 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 FRRS1Q6ZNA5 592 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 NUP54Q7Z3B4 507 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 MARCH3Q86UD3 253 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 DPP10Q8N608 796 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 GATSQ8NAP1 163 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 CHDHQ8NE62 594 aaPredicted RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 MOAP1Q96BY2 351 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 ZG16BQ96DA0 208 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 ITCHQ96J02 903 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 SDF2Q99470 211 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 FAM173AQ9BQD7 235 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 DOHHQ9BU89 302 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 ZNF350Q9GZX5 532 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 QRSL1Q9H0R6 528 aaKnown RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 ZDHHC11Q9H8X9 412 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 TNFRSF10DQ9UBN6 386 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 FBXL2Q9UKC9 423 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 TRIM33Q9UPN9 1127 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 USP22Q9UPT9 525 aa11.95□□□□□ -0.5
CHFR-216ENST00000538235 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 USP9XQ93008 2570 aaPredicted RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 FASNP49327 2511 aaKnown RBP11.95□□□□□ -0.5
CHFR-216ENST00000538235 EIF4E1BA6NMX2 242 aaKnown RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 NPIPA5E9PKD4 350 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 CBX6O95503 412 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 P04436 131 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 RNF224P0DH78 156 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 ZNF24P17028 368 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 GNLYP22749 145 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 CHI3L1P36222 383 aaPredicted RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 TRPC1P48995 793 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 TMED10P49755 219 aaKnown RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 ZNHIT3Q15649 155 aaPredicted RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 DECR1Q16698 335 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 HYAL4Q2M3T9 481 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 RPS26P11Q5JNZ5 115 aaPredicted RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 TYW3Q6IPR3 259 aaKnown RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 ANGPTL8Q6UXH0 198 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 TRILQ7L0X0 811 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 DHDDSQ86SQ9 333 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 MTDHQ86UE4 582 aaKnown RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 DND1Q8IYX4 353 aaKnown RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 ADAMTS15Q8TE58 950 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 TMEM41AQ96HV5 264 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 GNRHR2Q96P88 292 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 SECISBP2Q96T21 854 aaKnown RBP11.94□□□□□ -0.5
CHFR-216ENST00000538235 SLC38A1Q9H2H9 487 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 SLC6A15Q9H2J7 730 aa11.94□□□□□ -0.5
CHFR-216ENST00000538235 PLSCR2Q9NRY7 297 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms