RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 GOLGA8OA6NCC3 632 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 GOLGA8NF8WBI6 632 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 GOLGA8RI6L899 631 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 SCAMP2O15127 329 aaKnown RBP8.1□□□□□ -1.11
USP28-205ENST00000537706 UGT2B11O75310 529 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 REM1O75628 298 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 GPX3P22352 226 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 MGAT1P26572 445 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 HSD17B3P37058 310 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 CLDN20P56880 219 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 IL2P60568 153 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 SLAMF1Q13291 335 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 KLF1Q13351 362 aaPredicted RBP8.1□□□□□ -1.11
USP28-205ENST00000537706 LAPTM5Q13571 262 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 UAP1Q16222 522 aaPredicted RBP8.1□□□□□ -1.11
USP28-205ENST00000537706 GLYR1Q49A26 553 aaPredicted RBP8.1□□□□□ -1.11
USP28-205ENST00000537706 VAX1Q5SQQ9 334 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 OR5M10Q6IEU7 315 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 CCDC89Q8N998 374 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 TMEM186Q96B77 213 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 SNX18Q96RF0 628 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 TXLNGYQ9BZA5 131 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 CXorf21Q9HAI6 301 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 GRHL1Q9NZI5 618 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 PAK5Q9P286 719 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 MED16Q9Y2X0 877 aa8.1□□□□□ -1.11
USP28-205ENST00000537706 OR6C70A6NIJ9 312 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 TIMM23O14925 209 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 WDR47O94967 919 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 SCELO95171 688 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 STAMBPO95630 424 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 FPR2P25090 351 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 SLC6A8P48029 635 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 RAP1GDS1P52306 607 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 NNATQ16517 81 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 ZSWIM7Q19AV6 140 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 TTMPQ5BVD1 217 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 PAGE2BQ5JRK9 111 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 ZDHHC24Q6UX98 284 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 TFAP2EQ6VUC0 442 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 SLCO4C1Q6ZQN7 724 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 GRK7Q8WTQ7 553 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 SORCS2Q96PQ0 1159 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 HBEGFQ99075 208 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 TRIM31Q9BZY9 425 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 RAB1BQ9H0U4 201 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 DSN1Q9H410 356 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 HIF1ANQ9NWT6 349 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 SYBUQ9NX95 663 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 GPRC5BQ9NZH0 403 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 OR2M5A3KFT3 312 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 GOLGA6L10A6NI86 522 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 GOLGA8MH3BSY2 632 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 SHOX2O60902 331 aaPredicted RBP8.09□□□□□ -1.11
USP28-205ENST00000537706 KRT14P02533 472 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 VSIG8P0DPA2 414 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 GGT1P19440 569 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 NT5EP21589 574 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 GIFP27352 417 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 PIK3R1P27986 724 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 IL12BP29460 328 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 HNMTP50135 292 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 PSPHP78330 225 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 RASGEF1BQ0VAM2 473 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 MLC1Q15049 377 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 RNPS1Q15287 305 aaKnown RBP8.09□□□□□ -1.11
USP28-205ENST00000537706 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.09□□□□□ -1.11
USP28-205ENST00000537706 PAQR3Q6TCH7 311 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 WDR75Q8IWA0 830 aaKnown RBP8.09□□□□□ -1.11
USP28-205ENST00000537706 ZNF615Q8N8J6 731 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 OR51F2Q8NH61 342 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 UBE2E3Q969T4 207 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 ZBTB9Q96C00 473 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 FBXO17Q96EF6 278 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 LYARQ9NX58 379 aaKnown RBP8.09□□□□□ -1.11
USP28-205ENST00000537706 EHD3Q9NZN3 535 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 PRODH2Q9UF12 536 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 BCAP29Q9UHQ4 241 aa8.09□□□□□ -1.11
USP28-205ENST00000537706 TRRAPQ9Y4A5 3859 aa8.09□□□□□ -1.12
USP28-205ENST00000537706 HMGB1P1B2RPK0 211 aaPredicted RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 RTCAO00442 366 aaKnown RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 NDUFB5O43674 189 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 NUDT17P0C025 328 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 NR2F6P10588 404 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 CD40P25942 277 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 SERPINB1P30740 379 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 CLK3P49761 638 aaKnown RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 PDAP1Q13442 181 aaKnown RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 CCNIQ14094 377 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 PPP1R7Q15435 360 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 CCNG2Q16589 344 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 CEP85LQ5SZL2 805 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 C18orf63Q68DL7 685 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 OR4C11Q6IEV9 310 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 FAHD2BQ6P2I3 314 aaPredicted RBP8.08□□□□□ -1.12
USP28-205ENST00000537706 C17orf107Q6ZR85 190 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 ZDHHC22Q8N966 263 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 OR10D3Q8NH80 312 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 SLC35B2Q8TB61 432 aa8.08□□□□□ -1.12
USP28-205ENST00000537706 FBXO25Q8TCJ0 367 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms