RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TVP23BQ9NYZ1 205 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 WNT16Q9UBV4 365 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 OSGIN1Q9UJX0 560 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 DIMT1Q9UNQ2 313 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 PLCL2Q9UPR0 1127 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 TMEM5Q9Y2B1 443 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 MRPS2Q9Y399 296 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 A0A1W2PPC1 479 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 ZNF860A6NHJ4 632 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 MAGEB3O15480 346 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 PRODHO43272 600 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 MAN1A2O60476 641 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 FCMRO60667 390 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 CTNSO60931 367 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 NADKO95544 446 aaPredicted RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 ZBTB11O95625 1053 aaPredicted RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 DBTP11182 482 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 FUT4P22083 530 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 PTGER1P34995 402 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 OMPP47874 163 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 STARD6P59095 220 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 VBP1P61758 197 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 EFNB1P98172 346 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 MGAT2Q10469 447 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 RAB40BQ12829 278 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 SNAPC1Q16533 368 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 TRMT12Q53H54 448 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 TUBA3EQ6PEY2 450 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 C19orf48Q6RUI8 117 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 ZNF836Q6ZNA1 936 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 GALNT12Q8IXK2 581 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 SLC43A2Q8N370 569 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 WDR36Q8NI36 951 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 GPR151Q8TDV0 419 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 CHPT1Q8WUD6 406 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 ANKRD9Q96BM1 317 aaPredicted RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 PLEKHA8Q96JA3 519 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 SPACA7Q96KW9 195 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 LMF2Q9BU23 707 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 QRSL1Q9H0R6 528 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 DCSTAMPQ9H295 470 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 SEMA4GQ9NTN9 838 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 SEC14L4Q9UDX3 406 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 MDC1Q14676 2089 aaKnown RBP12.64□□□□□ -0.39
SMG6-203ENST00000536871 TLCD2A6NGC4 264 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 CPSF4LA6NMK7 179 aaKnown RBP12.64□□□□□ -0.39
SMG6-203ENST00000536871 TMX2-CTNND1H3BSU7 103 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 CHST10O43529 356 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 BRINP1O60477 761 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 TPST2O60704 377 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 LDB3O75112 727 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 PTHP01270 115 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 SCG5P05408 212 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 TYRP1P17643 537 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 IGLV3-21P80748 117 aaPredicted RBP12.64□□□□□ -0.39
SMG6-203ENST00000536871 ZNF91Q05481 1191 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 SYT16Q17RD7 645 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 OGFOD3Q6PK18 319 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 DGLUCYQ7Z3D6 616 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 NLGN4XQ8N0W4 816 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 ZDHHC12Q96GR4 267 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 HS6ST2Q96MM7 605 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 ZNF559Q9BR84 538 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 TSSK6Q9BXA6 273 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 PRO3102Q9H379 93 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 ISYNA1Q9NPH2 558 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 ENAMQ9NRM1 1142 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 IL20Q9NYY1 176 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 SELENONQ9NZV5 590 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 CHST2Q9Y4C5 530 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 MYO9BQ13459 2157 aa12.64□□□□□ -0.39
SMG6-203ENST00000536871 SLC9B1P1A6NJY1 282 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 LMO7DNF2Z398 122 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 H0YIG0 161 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 SGK494L7N484 410 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 ZNF749O43361 778 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 TLX2O43763 284 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 RDH16O75452 317 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 ZIC2O95409 532 aaPredicted RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 RAB36O95755 333 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 MYL12AP19105 171 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 ENDOUP21128 410 aaKnown RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 TMED10P49755 219 aaKnown RBP12.63□□□□□ -0.39
SMG6-203ENST00000536871 HSD17B7P56937 341 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 STX4Q12846 297 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 SERTAD2Q14140 314 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 MED22Q15528 200 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 C3orf38Q5JPI3 329 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 ZNF613Q6PF04 617 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 GDF7Q7Z4P5 450 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 GRAMD2AQ8IUY3 354 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 CDK20Q8IZL9 346 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 CLIP4Q8N3C7 705 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 MINDY2Q8NBR6 621 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 NDNFQ8TB73 568 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 LMX1AQ8TE12 382 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 ZG16BQ96DA0 208 aa12.63□□□□□ -0.39
SMG6-203ENST00000536871 ANKRA2Q9H9E1 313 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms