RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 FADS6Q8N9I5 356 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 NUP43Q8NFH3 380 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 OR5M1Q8NGP8 315 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 AENQ8WTP8 325 aaKnown RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 DUSP19Q8WTR2 217 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 SLC9A6Q92581 669 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 WNT2BQ93097 391 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 ZBED6CLQ96FA7 236 aaPredicted RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 TM9SF2Q99805 663 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 POLDIP3Q9BY77 421 aaKnown RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 TBL1XR1Q9BZK7 514 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 ROPN1BQ9BZX4 212 aaPredicted RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 ROPN1Q9HAT0 212 aaPredicted RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 C3orf14Q9HBI5 128 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 FAM120CQ9NX05 1096 aaKnown RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 ABCG2Q9UNQ0 655 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 TMED5Q9Y3A6 229 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 MRPS18CQ9Y3D5 142 aaKnown RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 CCDC168Q8NDH2 2452 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 TBX19O60806 448 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 SKAP2O75563 359 aaPredicted RBP12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 RCBTB2O95199 551 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 SLU7O95391 586 aaKnown RBP12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 IGKV1D-16P01601 117 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 FGF4P08620 206 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 BCKDHAP12694 445 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 B3GALT5-AS1P59052 145 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 PDE7AQ13946 482 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 GRAMD1BQ3KR37 738 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 EMBQ6PCB8 327 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 CHMP1BQ7LBR1 199 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 P4HA3Q7Z4N8 544 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 ADGRE4PQ86SQ3 457 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 CEP70Q8NHQ1 597 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 LINC01560Q8TB33 94 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 OTUB1Q96FW1 271 aaPredicted RBP12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 ZNF764Q96H86 408 aaPredicted RBP12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 YIPF4Q9BSR8 244 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 C1orf50Q9BV19 199 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 PTGES2Q9H7Z7 377 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 CLCF1Q9UBD9 225 aa12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 FOXD3Q9UJU5 478 aaPredicted RBP12.93□□□□□ -0.34
RTN3P1-201ENST00000536295 TUBAL3A6NHL2 446 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 TTC36A6NLP5 189 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 TMEM114B3SHH9 223 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 H0YC42 278 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 SEC14L5O43304 696 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ANKRD17O75179 2603 aaKnown RBP12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ANGPTL1O95841 491 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 TGM6O95932 706 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 IL18BPO95998 194 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 IFI6P09912 130 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ACP2P11117 423 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 MAPK1P28482 360 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 DNAJA1P31689 397 aaKnown RBP12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ARRB2P32121 409 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 HPCAL1P37235 193 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ASMTP46597 345 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 CPA2P48052 419 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 TPD52P55327 224 aaPredicted RBP12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 TESK1Q15569 626 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 VPS26BQ4G0F5 336 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 FBXW10Q5XX13 1052 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 FIGNL1Q6PIW4 674 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 APOOLQ6UXV4 268 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 KIF18BQ86Y91 864 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 CDRT4Q8N9R6 151 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 OR7A2PQ8NGA2 310 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 FAM222BQ8WU58 562 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 JADE3Q92613 823 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 CAVIN3Q969G5 261 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 C1GALT1C1Q96EU7 318 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 C16orf58Q96GQ5 468 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 PPP3R2Q96LZ3 170 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 C3orf30Q96M34 536 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 MS4A4EQ96PG1 132 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 SFXN3Q9BWM7 321 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 RBM24Q9BX46 236 aaKnown RBP12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 CLEC4MQ9H2X3 399 aaPredicted RBP12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ACSS1Q9NUB1 689 aaPredicted RBP12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 JKAMPQ9P055 326 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ZDHHC2Q9UIJ5 367 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 ZNF337Q9Y3M9 751 aa12.92□□□□□ -0.34
RTN3P1-201ENST00000536295 DOCK7Q96N67 2140 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 A6NNC1 897 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 SHISA8B8ZZ34 492 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 H3BML4 177 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 SCAMP2O15127 329 aaKnown RBP12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 EMC8O43402 210 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 NKX2-2O95096 273 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 BPGMP07738 259 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 PEPDP12955 493 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 FRKP42685 505 aaPredicted RBP12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 ART1P52961 327 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 GANABQ14697 944 aaKnown RBP12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 ATP6AP1LQ52LC2 224 aa12.91□□□□□ -0.34
RTN3P1-201ENST00000536295 XKR7Q5GH72 579 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms