RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SPATA3Q8NHX4 192 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PPP1R14CQ8TAE6 165 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 METTL6Q8TCB7 284 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PAFAH2Q99487 392 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TACO1Q9BSH4 297 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 EBPLQ9BY08 206 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GRPEL1Q9HAV7 217 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 C3orf14Q9HBI5 128 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 DDX18Q9NVP1 670 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 FAM120CQ9NX05 1096 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 STK38LQ9Y2H1 464 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 AP4B1Q9Y6B7 739 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ESYT3A0FGR9 886 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 C17orf51A8MQB3 221 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GMFGO60234 142 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 KCNH1O95259 989 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SYNGR4O95473 234 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CGAP01215 116 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TIA1P31483 386 aaKnown RBP eCLIP11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SUCLG1P53597 346 aaKnown RBP11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CLDN20P56880 219 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OCRLQ01968 901 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CLCQ05315 142 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 DMTNQ08495 405 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 VEZF1Q14119 521 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TRADDQ15628 312 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SPDYAQ5MJ70 313 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TCHHL1Q5QJ38 904 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ALKBH2Q6NS38 261 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TMEM107Q6UX40 140 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GPRIN3Q6ZVF9 776 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 METTL25Q8N6Q8 603 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 C16orf78Q8WTQ4 265 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 C1GALT1C1Q96EU7 318 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GMPPAQ96IJ6 420 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HHATLQ9HCP6 504 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PAQR5Q9NXK6 330 aaPredicted RBP11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 NINJ2Q9NZG7 142 aa11.66□□□□□ -0.54
TNFRSF1A-207ENST00000535958 A0A087WV62 115 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TRIM49D1C9J1S8 452 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 POC1B-GALNT4F8VUJ3 575 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PPP6CO00743 305 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 JUNP05412 331 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ANXA4P09525 319 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ME2P23368 584 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MAGEA12P43365 314 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 RPS4XP62701 263 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PSG6Q00889 435 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SLC7A5Q01650 507 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 BTKQ06187 659 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CKAP4Q07065 602 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF763Q0D2J5 394 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 C17orf67Q0P5P2 114 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 IMPG1Q17R60 797 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GLYR1Q49A26 553 aaPredicted RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 BEND4Q6ZU67 534 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MARCH3Q86UD3 253 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 DUSP19Q8WTR2 217 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GTPBP3Q969Y2 492 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TRMT61AQ96FX7 289 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PLPPR2Q96GM1 343 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF382Q96SR6 550 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 C1QTNF3Q9BXJ4 246 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ACPTQ9BZG2 426 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ACTR6Q9GZN1 396 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TSPYL1Q9H0U9 437 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CLEC4AQ9UMR7 237 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 VDAC3Q9Y277 283 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CSPG4Q6UVK1 2322 aa11.65□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HS3ST1O14792 307 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 FADS1O60427 444 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 AQP8O94778 261 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 ANGPTL1O95841 491 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 NID1P14543 1247 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 ZNF17P17021 662 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 DDCP20711 480 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 HSD17B3P37058 310 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 ZNF41P51814 821 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 C2orf80Q0P641 193 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 PDSS1Q5T2R2 415 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SH2D5Q6ZV89 423 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 WDR75Q8IWA0 830 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 MMGT1Q8N4V1 131 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 ZNF611Q8N823 705 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 APIPQ96GX9 242 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 REXO5Q96IC2 774 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 MARK4Q96L34 752 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CDC42EP4Q9H3Q1 356 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 NGBQ9NPG2 151 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 GLRX2Q9NS18 164 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 GRID1Q9ULK0 1009 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 LAMP3Q9UQV4 416 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 SNX8Q9Y5X2 465 aa11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-207ENST00000535958 A0A087WZY1 265 aa11.63□□□□□ -0.55
TNFRSF1A-207ENST00000535958 B4DXG7 233 aa11.63□□□□□ -0.55
TNFRSF1A-207ENST00000535958 CLOCKO15516 846 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms