RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ZNF319	Q9P2F9	582 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	PILRB	Q9UKJ0	227 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF346	Q9UL40	294 aa	Known RBP	4.08	□□□□□ -1.76
ATM-223	ENST00000533979	SATB2	Q9UPW6	733 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	IFT52	Q9Y366	437 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	RIPK3	Q9Y572	518 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979		R4GN57	208 aa		4.08	□□□□□ -1.76
ATM-223	ENST00000533979	MYH14	Q7Z406	1995 aa	Known RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	CASP8AP2	Q9UKL3	1982 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	NRAP	Q86VF7	1730 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	MEGF6	O75095	1541 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	RNF123	Q5XPI4	1314 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	SH3PXD2B	A1X283	911 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	MTMR11	A4FU01	709 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	KIF2A	O00139	706 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	POLR3G	O15318	223 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	POLR2D	O15514	142 aa	Known RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	DNAJB6	O75190	326 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	SAP30	O75446	220 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	ANP32D	O95626	131 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	FGFR1OP	O95684	399 aa	Known RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	NDUFB10	O96000	172 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	ATP1B1	P05026	303 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	PRSS1	P07477	247 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	RALB	P11234	206 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	DPEP1	P16444	411 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	NT5E	P21589	574 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	PTBP1	P26599	531 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	HOXA1	P49639	335 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	VEGFC	P49767	419 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	CARD18	P57730	90 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	SPAG1	Q07617	926 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	FGL1	Q08830	312 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	HERC3	Q15034	1050 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	ASPRV1	Q53RT3	343 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	XKR3	Q5GH77	459 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	PLPP4	Q5VZY2	271 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	LRRC66	Q68CR7	880 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	TMEM225	Q6GV28	225 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	CWC27	Q6UX04	472 aa	Known RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF852	Q6ZMS4	543 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	KDM7A	Q6ZMT4	941 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	CCDC80	Q76M96	950 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	TRMT11	Q7Z4G4	463 aa	Known RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	PARP8	Q8N3A8	854 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	MAPKAPK5-AS1	Q8N8E1	139 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	DDHD1	Q8NEL9	900 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM-223	ENST00000533979	HSD17B8	Q92506	261 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	PIGC	Q92535	297 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	WBP1	Q96G27	269 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	C4orf45	Q96LM5	186 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	C10orf90	Q96M02	699 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	ACCS	Q96QU6	501 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	RAB11FIP5	Q9BXF6	653 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	OR2B2	Q9GZK3	357 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	FLRT3	Q9NZU0	649 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	PIPOX	Q9P0Z9	390 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	SEC14L3	Q9UDX4	400 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	FBXL4	Q9UKA2	621 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	CDH9	Q9ULB4	789 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	SLC7A7	Q9UM01	511 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	KLHDC2	Q9Y2U9	406 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF175	Q9Y473	711 aa		4.07	□□□□□ -1.76
ATM-223	ENST00000533979	QRICH2	Q9H0J4	1663 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	CPSF1	Q10570	1443 aa	Known RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	PPIAL4C	A0A0B4J2A2	164 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	LRRC30	A6NM36	301 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	TCP11X1	B4DZS4	312 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	FOXE1	O00358	373 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	RNF113A	O15541	343 aa	Known RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	STK17B	O94768	372 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	KRT14	P02533	472 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	VTN	P04004	478 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	PPIAL4G	P0DN37	164 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	IGHV4-31	P0DP07	118 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	DARS	P14868	501 aa	Known RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	TSPAN8	P19075	237 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	MX1	P20591	662 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	GLRA1	P23415	457 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	PSMA2	P25787	234 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	SYK	P43405	635 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	LINC01547	P58512	204 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	HERVK_113	P63132	956 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	ERVK-8	P63133	956 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	ACY1	Q03154	408 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	DRP2	Q13474	957 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	HNRNPD	Q14103	355 aa	Known RBP	4.06	□□□□□ -1.76
ATM-223	ENST00000533979	IL18	Q14116	193 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	GRB14	Q14449	540 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	TCEAL6	Q6IPX3	200 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	FAM171B	Q6P995	826 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	ZNF841	Q6ZN19	808 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	DPY19L2P2	Q6ZN68	376 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	KCTD8	Q6ZWB6	473 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	C17orf64	Q86WR6	236 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	WDR49	Q8IV35	697 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	OFCC1	Q8IZS5	231 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	SYT14	Q8NB59	555 aa		4.06	□□□□□ -1.76
ATM-223	ENST00000533979	NFAM1	Q8NET5	270 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms