RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 PEPDP12955 493 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 ZNF708P17019 499 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 CLDN18P56856 261 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 EEF1A1P68104 462 aaKnown RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 GANABQ14697 944 aaKnown RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 BCL2A1Q16548 175 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 EEF1A1P5Q5VTE0 462 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 RAET1LQ5VY80 246 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 P4HA3Q7Z4N8 544 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 R3HCC1LQ7Z5L2 792 aaKnown RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 MARCH3Q86UD3 253 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 FADS6Q8N9I5 356 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 CDRT4Q8N9R6 151 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 NUP43Q8NFH3 380 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 OR2M3Q8NG83 312 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 AGR3Q8TD06 166 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 SLC9A6Q92581 669 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 INTS12Q96CB8 462 aaKnown RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 MTERF3Q96E29 417 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 RMND5BQ96G75 393 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 ZNF764Q96H86 408 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 FCRL1Q96LA6 429 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 PPP3R2Q96LZ3 170 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 UCN2Q96RP3 112 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 GPATCH1Q9BRR8 931 aaKnown RBP13.99□□□□□ -0.17
CPSF1-211ENST00000533492 SFXN3Q9BWM7 321 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 FLRT3Q9NZU0 649 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 LGALS13Q9UHV8 139 aa13.99□□□□□ -0.17
CPSF1-211ENST00000533492 ANKHD1Q8IWZ3 2542 aaKnown RBP13.98□□□□□ -0.17
CPSF1-211ENST00000533492 GXYLT2A0PJZ3 443 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 PIP5K1BO14986 540 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 UTS2O95399 124 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 BCKDHAP12694 445 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 MAPK1P28482 360 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 DNAJA1P31689 397 aaKnown RBP13.98□□□□□ -0.17
CPSF1-211ENST00000533492 CPA2P48052 419 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 EEFSECP57772 596 aaKnown RBP13.98□□□□□ -0.17
CPSF1-211ENST00000533492 C17orf67Q0P5P2 114 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 FOXF2Q12947 444 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 UGT3A2Q3SY77 523 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 ZNF385BQ569K4 471 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 FBXW10Q5XX13 1052 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 EMBQ6PCB8 327 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 PLXDC2Q6UX71 529 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 LRIG3Q6UXM1 1119 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 ZCCHC23Q6ZST2 131 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 ADGRE4PQ86SQ3 457 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 UBQLNLQ8IYU4 475 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 MEIOBQ8N635 442 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 GOT1L1Q8NHS2 421 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-211ENST00000533492 PIK3R3Q92569 461 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 NRGNQ92686 78 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 CLEC4MQ9H2X3 399 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-211ENST00000533492 RASSF1Q9NS23 344 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 ACSS1Q9NUB1 689 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-211ENST00000533492 CLCF1Q9UBD9 225 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 EDARQ9UNE0 448 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 F8P00451 2351 aa13.98□□□□□ -0.17
CPSF1-211ENST00000533492 A6NNC1 897 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 B4DXG7 233 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 LINC01387J3KSC0 135 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 EMC8O43402 210 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 PEX11AO75192 247 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 NKX2-2O95096 273 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 SLU7O95391 586 aaKnown RBP13.97□□□□□ -0.17
CPSF1-211ENST00000533492 ANGPTL1O95841 491 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 EPXP11678 715 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 SERPINB5P36952 375 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 HPCAL1P37235 193 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 RPL3P39023 403 aaKnown RBP13.97□□□□□ -0.17
CPSF1-211ENST00000533492 ART1P52961 327 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 DIO3P55073 304 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 B3GALT5-AS1P59052 145 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 PDE7AQ13946 482 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 TESK1Q15569 626 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 LUZP2Q86TE4 346 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 EXOC3L1Q86VI1 746 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 GCNT2Q8N0V5 402 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 LINC01560Q8TB33 94 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 AENQ8WTP8 325 aaKnown RBP13.97□□□□□ -0.17
CPSF1-211ENST00000533492 C1GALT1C1Q96EU7 318 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 PIGQQ9BRB3 760 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 G6PC3Q9BUM1 346 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 RBM24Q9BX46 236 aaKnown RBP13.97□□□□□ -0.17
CPSF1-211ENST00000533492 RTN4RQ9BZR6 473 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 HHATLQ9HCP6 504 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 JKAMPQ9P055 326 aa13.97□□□□□ -0.17
CPSF1-211ENST00000533492 MED12LQ86YW9 2145 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 GMFGO60234 142 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 TGM6O95932 706 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 ALOX5P09917 674 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 CD1EP15812 388 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 EFNA1P20827 205 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-211ENST00000533492 FRKP42685 505 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-211ENST00000533492 PRR5P85299 388 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 SORDQ00796 357 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 DAZAP2Q15038 168 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-211ENST00000533492 GRAMD1BQ3KR37 738 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 ATP6AP1LQ52LC2 224 aa13.96□□□□□ -0.17
CPSF1-211ENST00000533492 OR2A2Q6IF42 318 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms