RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 TUBB1Q9H4B7 451 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 MEAF6Q9HAF1 191 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 NPHS2Q9NP85 383 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 MYNNQ9NPC7 610 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 SERHLQ9NQF3 203 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 GIMAP4Q9NUV9 329 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 FOXD3Q9UJU5 478 aaPredicted RBP10.28□□□□□ -0.76
CLCF1-202ENST00000533438 MRPS18CQ9Y3D5 142 aaKnown RBP10.28□□□□□ -0.76
CLCF1-202ENST00000533438 FIS1Q9Y3D6 152 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 WIF1Q9Y5W5 379 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 MED12LQ86YW9 2145 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 PCNX3Q9H6A9 2034 aa10.28□□□□□ -0.76
CLCF1-202ENST00000533438 ZNF469Q96JG9 3925 aaPredicted RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 ANKHD1Q8IWZ3 2542 aaKnown RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 A0A087WV62 115 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 TRPC5OSA6NMA1 111 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 PIP5K1BO14986 540 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 RSL1D1O76021 490 aaKnown RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 SLITRK5O94991 958 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 PSMG1O95456 288 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 JUNP05412 331 aaKnown RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 HOXB4P17483 251 aaPredicted RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 SRD5A2P31213 254 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 DNAJA1P31689 397 aaKnown RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 UQCRC1P31930 480 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 KIR2DL3P43628 341 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 GAS1P54826 345 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 C2orf80Q0P641 193 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 EFR3AQ14156 821 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 KIAA0040Q15053 153 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 PDCD2Q16342 344 aaPredicted RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 XKR7Q5GH72 579 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 SPDYAQ5MJ70 313 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 EPGNQ6UW88 154 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 SPATA21Q7Z572 469 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 PIGWQ7Z7B1 504 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 ZZZ3Q8IYH5 903 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 C9orf106Q8NAJ2 232 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 OR4N2Q8NGD1 307 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 RFWD2Q8NHY2 731 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 NRGNQ92686 78 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 MAELQ96JY0 434 aaKnown RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 BBS4Q96RK4 519 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 UCN2Q96RP3 112 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 ELAC2Q9BQ52 826 aaKnown RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 TUBA1CQ9BQE3 449 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 G6PC3Q9BUM1 346 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 NUF2Q9BZD4 464 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 FAM107BQ9H098 131 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 TAS2R9Q9NYW1 312 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 CRIM1Q9NZV1 1036 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 JKAMPQ9P055 326 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 FBXL2Q9UKC9 423 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 CCL27Q9Y4X3 112 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 POLR3HQ9Y535 204 aaPredicted RBP10.27□□□□□ -0.77
CLCF1-202ENST00000533438 DNHD1Q96M86 4753 aa10.27□□□□□ -0.77
CLCF1-202ENST00000533438 SPG11Q96JI7 2443 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 NPIPB8E9PQR5 432 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 UPK1AO00322 258 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 PLOD2O00469 737 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 SDHDO14521 159 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 COQ9O75208 318 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 SKAP2O75563 359 aaPredicted RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 IL18BPO95998 194 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 CYP4B1P13584 511 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 PRPH2P23942 346 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 CTSSP25774 331 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 IL12BP29460 328 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 GCKP35557 465 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 KRT20P35900 424 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 LHX2P50458 406 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 NCBP2P52298 156 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 AQP5P55064 265 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 RCAN2Q14206 197 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 IMPG1Q17R60 797 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 FLYWCH1Q4VC44 716 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 NOXRED1Q6NXP6 359 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 ENPP6Q6UWR7 440 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 LARP4Q71RC2 724 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 IFNEQ86WN2 208 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 SLC44A2Q8IWA5 706 aaPredicted RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 OR2L13Q8N349 312 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 OR14L1PQ8NHC6 308 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 BCAS4Q8TDM0 211 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 C10orf82Q8WW14 230 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 EFHD2Q96C19 240 aaPredicted RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 LRRC46Q96FV0 321 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 THOC1Q96FV9 657 aaKnown RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 METTL2AQ96IZ6 378 aaKnown RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 GPATCH1Q9BRR8 931 aaKnown RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 GLIPR2Q9H4G4 154 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 RABEP2Q9H5N1 569 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 RASSF1Q9NS23 344 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 DNAJB12Q9NXW2 375 aaKnown RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 TAS2R10Q9NYW0 307 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 CLCF1Q9UBD9 225 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 DCTN4Q9UJW0 460 aa10.26□□□□□ -0.77
CLCF1-202ENST00000533438 C19orf53Q9UNZ5 99 aaPredicted RBP10.26□□□□□ -0.77
CLCF1-202ENST00000533438 WBP11Q9Y2W2 641 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms