RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 EFHD2Q96C19 240 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-217ENST00000532877 ASB9Q96DX5 294 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 RASL10BQ96S79 203 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 TREX2Q9BQ50 279 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-217ENST00000532877 G6PC3Q9BUM1 346 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 PCDHAC1Q9H158 963 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 SLC38A1Q9H2H9 487 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 CDCP1Q9H5V8 836 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 CPNE5Q9HCH3 593 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 FBXO34Q9NWN3 711 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 SNX13Q9Y5W8 968 aa13.18□□□□□ -0.3
COL16A1-217ENST00000532877 DSPPQ9NZW4 1301 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 ANKRD65E5RJM6 399 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 K7ENP7 123 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 CXCR6O00574 342 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 ARPC2O15144 300 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 GSTA4O15217 222 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 KIAA0513O60268 411 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 FCMRO60667 390 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 STX11O75558 287 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 DNAJB5O75953 348 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 PGM3O95394 542 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 IL33O95760 270 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 NCK1P16333 377 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 ATP6V1C1P21283 382 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 KRT20P35900 424 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 SSR4P51571 173 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 UCNP55089 124 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 TMPRSS3P57727 454 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 TRIM25Q14258 630 aaKnown RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 ACER2Q5QJU3 275 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 INTS11Q5TA45 600 aaKnown RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 IRAK1BP1Q5VVH5 260 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 TYW3Q6IPR3 259 aaKnown RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 INO80CQ6PI98 192 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 LRRC74BQ6ZQY2 392 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 SLC15A4Q8N697 577 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 BBS10Q8TAM1 723 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 FIG4Q92562 907 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 TTC9Q92623 222 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 DIO2Q92813 273 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 RAB3IPQ96QF0 476 aaPredicted RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 BCL2L10Q9HD36 194 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 POLE3Q9NRF9 147 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 CALML5Q9NZT1 146 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 MAGEL2Q9UJ55 1249 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 MRTO4Q9UKD2 239 aaKnown RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 YARS2Q9Y2Z4 477 aaKnown RBP13.17□□□□□ -0.3
COL16A1-217ENST00000532877 WDR45Q9Y484 360 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 NPFFR2Q9Y5X5 522 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 KCNMB2Q9Y691 235 aa13.17□□□□□ -0.3
COL16A1-217ENST00000532877 A0A0G2JPF8 293 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 CFAP73A6NFT4 308 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 A6NL46 340 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 HNRNPCL2B2RXH8 293 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 HNRNPCL3B7ZW38 293 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 B8ZZF3 427 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 TSPAN2O60636 221 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-217ENST00000532877 REM1O75628 298 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 PPM1BO75688 479 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 GUSBP08236 651 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 FBXO45P0C2W1 286 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 HNRNPCL4P0DMR1 293 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 NQO1P15559 274 aaKnown RBP13.16□□□□□ -0.3
COL16A1-217ENST00000532877 ATP6V1B2P21281 511 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 IL12BP29460 328 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 SOX3P41225 446 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 TMED10P49755 219 aaKnown RBP13.16□□□□□ -0.3
COL16A1-217ENST00000532877 PSMD4P55036 377 aaKnown RBP13.16□□□□□ -0.3
COL16A1-217ENST00000532877 MS4A2Q01362 244 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 CHRNEQ04844 493 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 RAPSNQ13702 412 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 MEP1AQ16819 746 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 FLYWCH1Q4VC44 716 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 CRB2Q5IJ48 1285 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 CCDC80Q76M96 950 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 APLFQ8IW19 511 aaPredicted RBP13.16□□□□□ -0.3
COL16A1-217ENST00000532877 ZNF619Q8N2I2 560 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 ZNF354BQ96LW1 612 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 ADOQ96SZ5 270 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 SAP130Q9H0E3 1048 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 QRSL1Q9H0R6 528 aaKnown RBP13.16□□□□□ -0.3
COL16A1-217ENST00000532877 GPR83Q9NYM4 423 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 ACTR3BQ9P1U1 418 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 TEKT2Q9UIF3 430 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 MKLN1Q9UL63 735 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 POMPQ9Y244 141 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 UNC79Q9P2D8 2635 aa13.16□□□□□ -0.3
COL16A1-217ENST00000532877 FLNCQ14315 2725 aa13.15□□□□□ -0.3
COL16A1-217ENST00000532877 NPIPA5A0A0B4J1W7 369 aa13.15□□□□□ -0.3
COL16A1-217ENST00000532877 OR6C70A6NIJ9 312 aa13.15□□□□□ -0.3
COL16A1-217ENST00000532877 NPIPA7E9PJI5 369 aa13.15□□□□□ -0.3
COL16A1-217ENST00000532877 ACOT8O14734 319 aa13.15□□□□□ -0.3
COL16A1-217ENST00000532877 UGT2B11O75310 529 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms