RNA–Protein interactions for RNA: ENST00000532674.2

RPUSD4-206, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-206ENST00000532674 SOX30O94993 753 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 PLGP00747 810 aaPredicted RBP16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 HSD3B1P14060 373 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 CHN1P15882 459 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 HSD3B2P26439 372 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 CLK3P49761 638 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 CTBP2P56545 445 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 RAE1P78406 368 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 ZNF155Q12901 538 aaPredicted RBP16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 TSNAXIP1Q2TAA8 658 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 PPP4R4Q6NUP7 873 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 MARCH3Q86UD3 253 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 WFDC8Q8IUA0 241 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 MAPK1IP1LQ8NDC0 245 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 TMEM204Q9BSN7 226 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 FANCFQ9NPI8 374 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 FAM120CQ9NX05 1096 aaKnown RBP16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 STOML1Q9UBI4 398 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 CLEC4AQ9UMR7 237 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 LAMP3Q9UQV4 416 aa16.79■□□□□ 0.28
RPUSD4-206ENST00000532674 STAB1Q9NY15 2570 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 RNF223E7ERA6 249 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 COQ9O75208 318 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 KRT6AP02538 564 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 KRT6BP04259 564 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 COL6A2P12110 1019 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 IL11P20809 199 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 PHBP35232 272 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 HSD17B3P37058 310 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 MAGEA12P43365 314 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 SLC6A8P48029 635 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 KRT6CP48668 564 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 DMTNQ08495 405 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 CSTF3Q12996 717 aaKnown RBP16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 DECR1Q16698 335 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 CLEC12BQ2HXU8 276 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 TCHHL1Q5QJ38 904 aaPredicted RBP16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 GGNQ86UU5 652 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 CDYL2Q8N8U2 506 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 C16orf78Q8WTQ4 265 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 AKAP1Q92667 903 aaKnown RBP eCLIP16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 GMPPAQ96IJ6 420 aaPredicted RBP16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 BBS4Q96RK4 519 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 MRPL57Q9BQC6 102 aaKnown RBP16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 C1QTNF3Q9BXJ4 246 aa16.78■□□□□ 0.28
RPUSD4-206ENST00000532674 RNF212BA8MTL3 300 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 EIF1AYO14602 144 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 EIF1AXP47813 144 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 RPS4XP62701 263 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 ACSM2AQ08AH3 577 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 C17orf67Q0P5P2 114 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 VEZF1Q14119 521 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 LGSNQ5TDP6 509 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 ACSM2BQ68CK6 577 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 HMBOX1Q6NT76 420 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 BEND4Q6ZU67 534 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 TRMT61AQ96FX7 289 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 ACTR6Q9GZN1 396 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 MRPL46Q9H2W6 279 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 ACSS3Q9H6R3 686 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 DMGDHQ9UI17 866 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 MRTO4Q9UKD2 239 aaKnown RBP16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 NFU1Q9UMS0 254 aa16.77■□□□□ 0.28
RPUSD4-206ENST00000532674 CHD3Q12873 2000 aaKnown RBP16.77■□□□□ 0.27
RPUSD4-206ENST00000532674 A0A087WV62 115 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 A8MT66 165 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 SHISA8B8ZZ34 492 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 GMFGO60234 142 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 SS18L1O75177 396 aaPredicted RBP16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 ULK1O75385 1050 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 IL33O95760 270 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 TP53P04637 393 aaPredicted RBP16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 CLCQ05315 142 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 RASA2Q15283 850 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 TMEM44Q2T9K0 475 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 SPIN4Q56A73 249 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 REG4Q9BYZ8 158 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 ACPTQ9BZG2 426 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 TBL1XR1Q9BZK7 514 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 SHCBP1LQ9BZQ2 653 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 Q9N2J8 555 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 C19orf53Q9UNZ5 99 aaPredicted RBP16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 GPR52Q9Y2T5 361 aa16.76■□□□□ 0.27
RPUSD4-206ENST00000532674 SONP18583 2426 aaKnown RBP16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 MYO1GB0I1T2 1018 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 IFNA2P01563 188 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 JUNP05412 331 aaKnown RBP16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 INHBAP08476 426 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 SBK3P0C264 359 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 IDUAP35475 653 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 RFX3P48380 749 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 NCBP2P52298 156 aaKnown RBP eCLIP16.75■□□□□ 0.279e-7■■■■□ 23.4
RPUSD4-206ENST00000532674 PSMD4P55036 377 aaKnown RBP16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 ZNHIT3Q15649 155 aaPredicted RBP16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 ETFDHQ16134 617 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 CTU2Q2VPK5 515 aaKnown RBP16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 ALKBH2Q6NS38 261 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 PODNL1Q6PEZ8 512 aa16.75■□□□□ 0.27
RPUSD4-206ENST00000532674 STK32CQ86UX6 486 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms