RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PCSK6P29122 969 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 RFX3P48380 749 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 PCYT1AP49585 367 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 NCBP2P52298 156 aaKnown RBP eCLIP16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 PON3Q15166 354 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 MARCH3Q86UD3 253 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 PRIMA1Q86XR5 153 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 NUDT8Q8WV74 236 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 SLC39A3Q9BRY0 314 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 STMN4Q9H169 189 aaPredicted RBP16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 ELOVL5Q9NYP7 299 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 FREM1Q5H8C1 2179 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 A0A087WUV0 522 aaPredicted RBP16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 FAM171A2A8MVW0 826 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 COQ9O75208 318 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 DDCP20711 480 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 FPR1P21462 350 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 GCAP28676 217 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 ECHS1P30084 290 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 EEFSECP57772 596 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 C2orf80Q0P641 193 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 GANABQ14697 944 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 GALNT18Q6P9A2 607 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 PPP1R14CQ8TAE6 165 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 DUSP19Q8WTR2 217 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 C1GALT1C1Q96EU7 318 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 KLHL4Q9C0H6 718 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 SDHAF3Q9NRP4 125 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 ABCG2Q9UNQ0 655 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 C19orf53Q9UNZ5 99 aaPredicted RBP16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 FBN3Q75N90 2809 aa16.57■□□□□ 0.24
SSSCA1-206ENST00000531405 A0A087WV62 115 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 EXOC1LA0A1B0GW35 172 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 UPK1AO00322 258 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 AQP8O94778 261 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 CD8BP10966 210 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 IMPDH1P20839 514 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 ATP5F1P24539 256 aaPredicted RBP16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 FOXA1P55317 472 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 ZNF763Q0D2J5 394 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 LCP2Q13094 533 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 GUSBP1Q15486 140 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 DECR1Q16698 335 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 EXOC3L2Q2M3D2 409 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 CYP27C1Q4G0S4 372 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 SPDYAQ5MJ70 313 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 LGSNQ5TDP6 509 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 PPP4R4Q6NUP7 873 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 NOA1Q8NC60 698 aaKnown RBP16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 TSPYL1Q9H0U9 437 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 GLIPR2Q9H4G4 154 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 PTGES2Q9H7Z7 377 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 FAM120CQ9NX05 1096 aaKnown RBP16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 PROCRQ9UNN8 238 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 ZNF175Q9Y473 711 aa16.56■□□□□ 0.24
SSSCA1-206ENST00000531405 FBN1P35555 2871 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 KIAA1324LA8MWY0 1029 aaPredicted RBP16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 PSMG1O95456 288 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 IL33O95760 270 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 ENO1P06733 434 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 PRKAA2P54646 552 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 PRSS57Q6UWY2 283 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 C20orf204Q6ZNR8 217 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 BDH2Q9BUT1 245 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 GSTO2Q9H4Y5 243 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 Q9N2J8 555 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 MID1IP1Q9NPA3 183 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 MIEF1Q9NQG6 463 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 DDX18Q9NVP1 670 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 CLEC4AQ9UMR7 237 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 NFU1Q9UMS0 254 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 POLR3HQ9Y535 204 aaPredicted RBP16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 COL6A5A8TX70 2615 aa16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 ANK3Q12955 4377 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 SONP18583 2426 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-206ENST00000531405 CHD3Q12873 2000 aaKnown RBP16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 GXYLT2A0PJZ3 443 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 UBFD1O14562 309 aaKnown RBP16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 URI1O94763 535 aaPredicted RBP16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 UTS2O95399 124 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 THBDP07204 575 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 TBXA2RP21731 343 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 SLC6A8P48029 635 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 PKNOX1P55347 436 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 RPS3AP61247 264 aaKnown RBP16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 SGCBQ16585 318 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 GRAMD1BQ3KR37 738 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 FAM71E1Q6IPT2 247 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 APOOLQ6UXV4 268 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 TIFABQ6ZNK6 161 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 FAM214BQ7L5A3 538 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 GGNQ86UU5 652 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 OR2L13Q8N349 312 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 METTL25Q8N6Q8 603 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 ELP4Q96EB1 424 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 L3HYPDHQ96EM0 354 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 AMDHD1Q96NU7 426 aa16.54■□□□□ 0.24
SSSCA1-206ENST00000531405 TBL1XR1Q9BZK7 514 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms