RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SLC52A3Q9NQ40 469 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 UVRAGQ9P2Y5 699 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 SLC23A2Q9UGH3 650 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 LCMT1Q9UIC8 334 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 ACAD8Q9UKU7 415 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 HEY1Q9Y5J3 304 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 LRRD1A4D1F6 860 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 C21orf140B9A014 251 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 K7EM74 188 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 CREG1O75629 220 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 TSHBP01222 138 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 H2AFZP0C0S5 128 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 ERVK-10P10266 1014 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 NELFEP18615 380 aaKnown RBP6.19□□□□□ -1.42
CSDE1-213ENST00000530784 MMP15P51511 669 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 AP1B1Q10567 949 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 PDK1Q15118 436 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 WASH2PQ6VEQ5 465 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 H2AFVQ71UI9 128 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 TMEM135Q86UB9 458 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 NT5DC3Q86UY8 548 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 ZNF547Q8IVP9 402 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 TRIM58Q8NG06 486 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 GDAP1Q8TB36 358 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 CT55Q8WUE5 264 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 CTNNBL1Q8WYA6 563 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-213ENST00000530784 SMPDL3BQ92485 455 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 RAPGEF5Q92565 580 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 IMP4Q96G21 291 aaKnown RBP6.19□□□□□ -1.42
CSDE1-213ENST00000530784 TTC25Q96NG3 672 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 AGAP3Q96P47 875 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 RNF157Q96PX1 679 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 VPS35Q96QK1 796 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 PSD2Q9BQI7 771 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 RAB33BQ9H082 229 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 SLC25A51Q9H1U9 297 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 ACTL8Q9H568 366 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 SLC40A1Q9NP59 571 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 LHX9Q9NQ69 397 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 TRIM10Q9UDY6 481 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 EPHA6Q9UF33 1036 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 RARRES3Q9UL19 164 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 CMAHPQ9Y471 501 aa6.19□□□□□ -1.42
CSDE1-213ENST00000530784 TEX13DA0A0J9YY54 714 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 DUXAA6NLW8 204 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 ZNF487B1APH4 448 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 ALOX12P18054 663 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 GABRB1P18505 474 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 KDELR1P24390 212 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 TNNT3P45378 269 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 PPP1CAP62136 330 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 ACY1Q03154 408 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 ODF2Q5BJF6 829 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 ZDHHC20Q5W0Z9 365 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 APLFQ8IW19 511 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 SIDT2Q8NBJ9 832 aaKnown RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 BRSK1Q8TDC3 778 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 TADA1Q96BN2 335 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 ZNF514Q96K75 400 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 OLFM3Q96PB7 478 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 BARD1Q99728 777 aaKnown RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 MAK16Q9BXY0 300 aaKnown RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 BARHL1Q9BZE3 327 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 XPO4Q9C0E2 1151 aaKnown RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 IMP3Q9NV31 184 aaKnown RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 FBXL17Q9UF56 701 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 NENFQ9UMX5 172 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 WDR37Q9Y2I8 494 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 ZFC3H1O60293 1989 aaKnown RBP6.18□□□□□ -1.42
CSDE1-213ENST00000530784 AHCTF1Q8WYP5 2266 aa6.18□□□□□ -1.42
CSDE1-213ENST00000530784 IGHV5-51A0A0C4DH38 117 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 GLYATL1P3A0A0U1RQE8 302 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 TLCD2A6NGC4 264 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 ARGFXA6NJG6 315 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 SCRG1O75711 98 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 POP7O75817 140 aaKnown RBP6.17□□□□□ -1.42
CSDE1-213ENST00000530784 TSPAN9O75954 239 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 GYPCP04921 128 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 PRSS56P0CW18 603 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 FOLR1P15328 257 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 PTPN4P29074 926 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 CHRNB4P30926 498 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 HMGCLP35914 325 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 SPAM1P38567 509 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 HADHAP40939 763 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 UQCRFS1P47985 274 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 UBASH3AP57075 661 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 RPS18P62269 152 aaKnown RBP6.17□□□□□ -1.42
CSDE1-213ENST00000530784 RPS15P62841 145 aaKnown RBP6.17□□□□□ -1.42
CSDE1-213ENST00000530784 DYNLT1P63172 113 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 PPP2R2BQ00005 443 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 DMPKQ09013 629 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 XRCC4Q13426 336 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 MESDQ14696 234 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 LDLRAP1Q5SW96 308 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 PLEKHS1Q5SXH7 462 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 FAM182AQ5T1J6 154 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 FHL5Q5TD97 284 aa6.17□□□□□ -1.42
CSDE1-213ENST00000530784 PWWP2BQ6NUJ5 590 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms